RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 SUGT1Q9Y2Z0 365 aa23.7■■□□□ 1.38
CLN8-208ENST00000635751 XRCC6P12956 609 aaKnown RBP eCLIP23.69■■□□□ 1.387e-9■■■■■ 47.1
CLN8-208ENST00000635751 DIXDC1Q155Q3 683 aa23.69■■□□□ 1.38
CLN8-208ENST00000635751 IGSF3O75054 1194 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 VIL1P09327 827 aaKnown RBP23.68■■□□□ 1.38
CLN8-208ENST00000635751 KLHL40Q2TBA0 621 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 MIGA1Q8NAN2 632 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 TTF2Q9UNY4 1162 aaKnown RBP23.68■■□□□ 1.38
CLN8-208ENST00000635751 CCDC171Q6TFL3 1326 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 MCTP1Q6DN14 999 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 KIAA0825Q8IV33 1275 aa23.68■■□□□ 1.38
CLN8-208ENST00000635751 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
CLN8-208ENST00000635751 FZD9O00144 591 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 GSTO1P78417 241 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 CIAPIN1Q6FI81 312 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 RSBN1LQ6PCB5 846 aaPredicted RBP23.67■■□□□ 1.38
CLN8-208ENST00000635751 ZDHHC9Q9Y397 364 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 SNX14Q9Y5W7 946 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 ADAMTSL1Q8N6G6 1762 aa23.67■■□□□ 1.38
CLN8-208ENST00000635751 GPAA1O43292 621 aa23.66■■□□□ 1.38
CLN8-208ENST00000635751 AIDAQ96BJ3 306 aa23.66■■□□□ 1.38
CLN8-208ENST00000635751 SCNN1DP51172 638 aa23.66■■□□□ 1.38
CLN8-208ENST00000635751 EIF6P56537 245 aaKnown RBP23.66■■□□□ 1.38
CLN8-208ENST00000635751 PTH1RQ03431 593 aa23.66■■□□□ 1.38
CLN8-208ENST00000635751 TMED8Q6PL24 325 aaPredicted RBP23.66■■□□□ 1.38
CLN8-208ENST00000635751 ZBTB12Q9Y330 459 aaPredicted RBP23.66■■□□□ 1.38
CLN8-208ENST00000635751 DDX49Q9Y6V7 483 aaKnown RBP23.66■■□□□ 1.38
CLN8-208ENST00000635751 TIAM2Q8IVF5 1701 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 GRIN3BO60391 1043 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 MBD4O95243 580 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 LDHCP07864 332 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 ARMT1Q9H993 441 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 RNF181Q9P0P0 153 aa23.65■■□□□ 1.38
CLN8-208ENST00000635751 MAGEB6P1A0A0J9YX57 407 aa23.64■■□□□ 1.38
CLN8-208ENST00000635751 DYNLL1P63167 89 aaKnown RBP23.64■■□□□ 1.38
CLN8-208ENST00000635751 TNIP1Q15025 636 aa23.64■■□□□ 1.38
CLN8-208ENST00000635751 VPS53Q5VIR6 699 aa23.64■■□□□ 1.38
CLN8-208ENST00000635751 LCORLQ8N3X6 602 aa23.64■■□□□ 1.38
CLN8-208ENST00000635751 AATFQ9NY61 560 aaKnown RBP eCLIP23.64■■□□□ 1.38
CLN8-208ENST00000635751 MROH7-TTC4A0A0A0MT08 1334 aa23.64■■□□□ 1.37
CLN8-208ENST00000635751 MYO3BQ8WXR4 1341 aa23.64■■□□□ 1.37
CLN8-208ENST00000635751 NOL8Q76FK4 1167 aaKnown RBP23.63■■□□□ 1.37
CLN8-208ENST00000635751 SLF2Q8IX21 1173 aa23.63■■□□□ 1.37
CLN8-208ENST00000635751 STRBPQ96SI9 672 aaKnown RBP23.63■■□□□ 1.37
CLN8-208ENST00000635751 GRPEL1Q9HAV7 217 aa23.63■■□□□ 1.37
CLN8-208ENST00000635751 GMLQ99445 158 aa23.63■■□□□ 1.37
CLN8-208ENST00000635751 RIOK1Q9BRS2 568 aaKnown RBP23.63■■□□□ 1.37
CLN8-208ENST00000635751 LMBRD1Q9NUN5 540 aa23.63■■□□□ 1.37
CLN8-208ENST00000635751 CDK5RAP2Q96SN8 1893 aa23.63■■□□□ 1.37
CLN8-208ENST00000635751 C9orf131Q5VYM1 1079 aa23.62■■□□□ 1.37
CLN8-208ENST00000635751 FAM163AQ96GL9 167 aaPredicted RBP23.62■■□□□ 1.37
CLN8-208ENST00000635751 ZNF541Q9H0D2 1346 aa23.62■■□□□ 1.37
CLN8-208ENST00000635751 HSPD1P10809 573 aaKnown RBP23.61■■□□□ 1.37
CLN8-208ENST00000635751 AGBL3Q8NEM8 1001 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 GJA3Q9Y6H8 435 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 BRD1O95696 1058 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 MAP4K1Q92918 833 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 TTC14Q96N46 770 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 RTN4Q9NQC3 1192 aaKnown RBP23.61■■□□□ 1.37
CLN8-208ENST00000635751 DAGLAQ9Y4D2 1042 aa23.61■■□□□ 1.37
CLN8-208ENST00000635751 GAKO14976 1311 aa23.6■■□□□ 1.37
CLN8-208ENST00000635751 CRKP46108 304 aa23.6■■□□□ 1.37
CLN8-208ENST00000635751 HHIPL2Q6UWX4 724 aa23.6■■□□□ 1.37
CLN8-208ENST00000635751 RASEFQ8IZ41 740 aa23.6■■□□□ 1.37
CLN8-208ENST00000635751 TEKT1Q969V4 418 aa23.6■■□□□ 1.37
CLN8-208ENST00000635751 BAZ2AQ9UIF9 1905 aaKnown RBP23.6■■□□□ 1.37
CLN8-208ENST00000635751 GPR75-ASB3A0A0A6YYF3 556 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 PRKAB2O43741 272 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 BAG3O95817 575 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 BTDP43251 543 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 NOL10Q9BSC4 688 aaKnown RBP23.59■■□□□ 1.37
CLN8-208ENST00000635751 MRIQ9BWK5 157 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 ECM29Q5VYK3 1845 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 FOXP2O15409 715 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 RBM5P52756 815 aaKnown RBP eCLIP23.59■■□□□ 1.37
CLN8-208ENST00000635751 PPP4CP60510 307 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 HDLBPQ00341 1268 aaKnown RBP23.59■■□□□ 1.37
CLN8-208ENST00000635751 KCNB2Q92953 911 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 DSCC1Q9BVC3 393 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 SLC4A4Q9Y6R1 1079 aa23.59■■□□□ 1.37
CLN8-208ENST00000635751 PANK2Q9BZ23 570 aa23.58■■□□□ 1.37
CLN8-208ENST00000635751 SERPINA10Q9UK55 444 aa23.58■■□□□ 1.37
CLN8-208ENST00000635751 PCDHAC2Q9Y5I4 1007 aa23.58■■□□□ 1.37
CLN8-208ENST00000635751 APPP05067 770 aa23.57■■□□□ 1.36
CLN8-208ENST00000635751 USP17L8P0C7I0 530 aa23.57■■□□□ 1.36
CLN8-208ENST00000635751 GNAT2P19087 354 aa23.57■■□□□ 1.36
CLN8-208ENST00000635751 OGFOD1Q8N543 542 aa23.57■■□□□ 1.36
CLN8-208ENST00000635751 SH3RF3Q8TEJ3 882 aaPredicted RBP23.57■■□□□ 1.36
CLN8-208ENST00000635751 RBM8AQ9Y5S9 174 aaKnown RBP23.57■■□□□ 1.36
CLN8-208ENST00000635751 PATL2C9JE40 543 aaKnown RBP23.56■■□□□ 1.36
CLN8-208ENST00000635751 AK2P54819 239 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 GAS2L3Q86XJ1 694 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 SDR42E1Q8WUS8 393 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 TM6SF1Q9BZW5 370 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 HDAC9Q9UKV0 1011 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 LIMCH1Q9UPQ0 1083 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 GSG1L2A8MUP6 293 aa23.56■■□□□ 1.36
CLN8-208ENST00000635751 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
CLN8-208ENST00000635751 GMPSP49915 693 aaPredicted RBP23.56■■□□□ 1.36
CLN8-208ENST00000635751 APOBEC3HQ6NTF7 200 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms