RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 USP26Q9BXU7 913 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 RNF208Q9H0X6 261 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 TTBK1Q5TCY1 1321 aaPredicted RBP8.48□□□□□ -1.05
LINC00254-202ENST00000633813 ALX3O95076 343 aa8.47□□□□□ -1.05
LINC00254-202ENST00000633813 PPP2R3AQ06190 1150 aa8.47□□□□□ -1.05
LINC00254-202ENST00000633813 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.05
LINC00254-202ENST00000633813 RUSC1Q9BVN2 902 aa8.47□□□□□ -1.05
LINC00254-202ENST00000633813 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
LINC00254-202ENST00000633813 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
LINC00254-202ENST00000633813 PCF11O94913 1555 aaKnown RBP8.47□□□□□ -1.05
LINC00254-202ENST00000633813 GNA15P30679 374 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 Q6ZS46 218 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 C12orf49Q9H741 205 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
LINC00254-202ENST00000633813 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
LINC00254-202ENST00000633813 LOC100289279A0A1B0GTE1 492 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00254-202ENST00000633813 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
LINC00254-202ENST00000633813 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 CCDC18Q5T9S5 1454 aa8.45□□□□□ -1.06
LINC00254-202ENST00000633813 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 ITGAEP38570 1179 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 POU4F3Q15319 338 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 DUSP9Q99956 384 aaKnown RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 CYP4F12Q9HCS2 524 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 PLB1Q6P1J6 1458 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 LRRC9Q6ZRR7 1453 aa8.44□□□□□ -1.06
LINC00254-202ENST00000633813 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
LINC00254-202ENST00000633813 HECW1Q76N89 1606 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 MAOBP27338 520 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
LINC00254-202ENST00000633813 UVSSAQ2YD98 709 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 EXOSC6Q5RKV6 272 aaKnown RBP8.43□□□□□ -1.06
LINC00254-202ENST00000633813 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 NRSN2Q9GZP1 204 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 UACAQ9BZF9 1416 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
LINC00254-202ENST00000633813 ERCC6L2Q5T890 1561 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 RAPGEF6Q8TEU7 1601 aa8.43□□□□□ -1.06
LINC00254-202ENST00000633813 FURINP09958 794 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
LINC00254-202ENST00000633813 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 MTUS2Q5JR59 1369 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 ABCA8O94911 1581 aa8.42□□□□□ -1.06
LINC00254-202ENST00000633813 USP17L7P0C7H9 530 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
LINC00254-202ENST00000633813 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 AK5Q9Y6K8 562 aa8.41□□□□□ -1.06
LINC00254-202ENST00000633813 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
LINC00254-202ENST00000633813 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-202ENST00000633813 PSMD2Q13200 908 aa8.4□□□□□ -1.06
LINC00254-202ENST00000633813 RSPO4Q2I0M5 234 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-202ENST00000633813 NKAPLQ5M9Q1 402 aa8.4□□□□□ -1.06
LINC00254-202ENST00000633813 SMG8Q8ND04 991 aaKnown RBP8.4□□□□□ -1.06
LINC00254-202ENST00000633813 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
LINC00254-202ENST00000633813 UTP4Q969X6 686 aaKnown RBP8.4□□□□□ -1.06
LINC00254-202ENST00000633813 CFAP43Q8NDM7 1665 aa8.4□□□□□ -1.07
LINC00254-202ENST00000633813 UHRF1BP1LA0JNW5 1464 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 ATP10BO94823 1461 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 TPTE2Q6XPS3 522 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 UBL7Q96S82 380 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
LINC00254-202ENST00000633813 CDK13Q14004 1512 aaKnown RBP8.39□□□□□ -1.07
LINC00254-202ENST00000633813 DAB2P98082 770 aa8.38□□□□□ -1.07
LINC00254-202ENST00000633813 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
LINC00254-202ENST00000633813 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
LINC00254-202ENST00000633813 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
LINC00254-202ENST00000633813 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms