RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 TRPC6Q9Y210 931 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 HSPA1LP34931 641 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 UBXN1Q04323 297 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 CEP128Q6ZU80 1094 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 SULF1Q8IWU6 871 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 PARD3BQ8TEW8 1205 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 BRF1Q92994 677 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 ZSWIM4Q9H7M6 989 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GOLGA6CA6NDK9 693 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GOLGA6BA6NDN3 693 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GOLGA6DP0CG33 693 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 FAM98CQ17RN3 349 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 NSMFQ6X4W1 530 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 RAB3IPQ96QF0 476 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 MLXIPQ9HAP2 919 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GOLGA6AQ9NYA3 693 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 HIBADHP31937 336 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 HSPA2P54652 639 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 KRT83P78385 493 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 HAUS3Q68CZ6 603 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 ABI1Q8IZP0 508 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 XPAP23025 273 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 Q6ZUG5 572 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 GLG1Q92896 1179 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 CIB2O75838 187 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 CALCOCO2Q13137 446 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TNFAIP1Q13829 316 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 USH1GQ495M9 461 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 HSP90AA4PQ58FG1 418 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TEX14Q8IWB6 1497 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 GRM8O00222 908 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TNFAIP3P21580 790 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 IRX5P78411 483 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 RILPL1Q5EBL4 403 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 NCAPH2Q6IBW4 605 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 PLCH2O75038 1416 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 RNF113AO15541 343 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 ITKQ08881 620 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 SLFN5Q08AF3 891 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TCP10Q12799 353 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 RNF216Q9NWF9 866 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 SPOPO43791 374 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 CCNT1O60563 726 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 LETM2Q2VYF4 491 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 ARHGEF11O15085 1522 aa7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 ATF7P17544 494 aaPredicted RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-207ENST00000631006 TYW5A2RUC4 315 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 SARNPP82979 210 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 GLT8D2Q9H1C3 349 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 TSTA3Q13630 321 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 ARHGEF16Q5VV41 709 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CCDC42Q96M95 316 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 C16orf45Q96MC5 204 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CTAGE15A4D2H0 777 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CTAGE8P0CG41 777 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 SLC12A2P55011 1212 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 YWHAEP62258 255 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CTAGE6Q86UF2 777 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CTAGE4Q8IX94 777 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 OPA1O60313 960 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 TSHZ3Q63HK5 1081 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 NFATC2IPQ8NCF5 419 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 RAD50Q92878 1312 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 SSFA2P28290 1259 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CASC4Q6P4E1 433 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 CERS3Q8IU89 383 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 ZKSCAN3Q9BRR0 538 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 TSGA10Q9BZW7 698 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 FAM114A2Q9NRY5 505 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 NCAPG2Q86XI2 1143 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 SKA2Q8WVK7 121 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 PSPC1Q8WXF1 523 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 PPME1Q9Y570 386 aa7.18□□□□□ -1.26
SRGAP1-207ENST00000631006 PARP10Q53GL7 1025 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 DCAF15Q66K64 600 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ZNF449Q6P9G9 518 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 KSR2Q6VAB6 950 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 TAOK1Q7L7X3 1001 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 OTUD6AQ7L8S5 288 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 KRT86O43790 486 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 DIXDC1Q155Q3 683 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SESTD1Q86VW0 696 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 RHPN1Q8TCX5 695 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CHMP6Q96FZ7 201 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 FAM83GA6ND36 823 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 MCM4P33991 863 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 MBIPQ9NS73 344 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 LMCD1Q9NZU5 365 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SWAP70Q9UH65 585 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CD19P15391 556 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms