RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 RRAGCQ9HB90 399 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 CD209Q9NNX6 404 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
LINC00550-202ENST00000629570 ZNF609O15014 1411 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 SURF6O75683 361 aaKnown RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 SASH1O94885 1247 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 VEGFAP15692 232 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 ADORA1P30542 326 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 TNIP1Q15025 636 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 ATP2B3Q16720 1220 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 ZNF804AQ7Z570 1209 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 PODNQ7Z5L7 613 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 SLF2Q8IX21 1173 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 LPIN2Q92539 896 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 FAM84BQ96KN1 310 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 GPRC5DQ9NZD1 345 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 CEP126Q9P2H0 1117 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 IQSEC3Q9UPP2 1182 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 JAG2Q9Y219 1238 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
LINC00550-202ENST00000629570 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-202ENST00000629570 COL1A1P02452 1464 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 PSME4Q14997 1843 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 EGFRP00533 1210 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 IFIT1P09914 478 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 SLC5A1P13866 664 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 IL1R1P14778 569 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 HIBADHP31937 336 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 EPHX2P34913 555 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 EPS15P42566 896 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 GTF2IP78347 998 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 IRX6P78412 446 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 DACT2Q5SW24 774 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 RSBN1LQ6PCB5 846 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 FBXO33Q7Z6M2 555 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 RPAP2Q8IXW5 612 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 CHMP4BQ9H444 224 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 TAF1DQ9H5J8 278 aaPredicted RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 RTN4Q9NQC3 1192 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 HACL1Q9UJ83 578 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 NOP58Q9Y2X3 529 aaKnown RBP6.86□□□□□ -1.31
LINC00550-202ENST00000629570 PCDHB15Q9Y5E8 787 aa6.86□□□□□ -1.31
LINC00550-202ENST00000629570 ARAP2Q8WZ64 1704 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 APBB1O00213 710 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 HMMRO75330 724 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
LINC00550-202ENST00000629570 PHKA1P46020 1223 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 TIMM10P62072 90 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 EAPPQ56P03 285 aaPredicted RBP6.85□□□□□ -1.31
LINC00550-202ENST00000629570 CAVIN4Q5BKX8 364 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 STRIP1Q5VSL9 837 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 CERS5Q8N5B7 392 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 TDRD7Q8NHU6 1098 aaKnown RBP6.85□□□□□ -1.31
LINC00550-202ENST00000629570 EXOC6Q8TAG9 804 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 GMLQ99445 158 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 SCN4AP35499 1836 aa6.85□□□□□ -1.31
LINC00550-202ENST00000629570 FAM205AQ6ZU69 1335 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 TOMM70O94826 608 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 RPS12P25398 132 aaKnown RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 CHAF1AQ13111 956 aaPredicted RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 RASGRF1Q13972 1273 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 TNNI3KQ59H18 835 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 CCDC102BQ68D86 513 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 KIAA0825Q8IV33 1275 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 C16orf71Q8IYS4 520 aaPredicted RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 AGBL3Q8NEM8 1001 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 DPF2Q92785 391 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 NEUROD6Q96NK8 337 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 IL1RAPL2Q9NP60 686 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 TLR7Q9NYK1 1049 aaKnown RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 CNOT7Q9UIV1 285 aaKnown RBP6.84□□□□□ -1.31
LINC00550-202ENST00000629570 AKAP2Q9Y2D5 859 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 FPGT-TNNI3KV9GXZ4 949 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 ADAMTSL1Q8N6G6 1762 aa6.84□□□□□ -1.31
LINC00550-202ENST00000629570 MYO3BQ8WXR4 1341 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
LINC00550-202ENST00000629570 FRAT2O75474 233 aaPredicted RBP6.83□□□□□ -1.32
LINC00550-202ENST00000629570 USP17L8P0C7I0 530 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 GGCXP38435 758 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 SLC4A3P48751 1232 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 HIRAP54198 1017 aaPredicted RBP6.83□□□□□ -1.32
LINC00550-202ENST00000629570 ZNF280AP59817 542 aaPredicted RBP6.83□□□□□ -1.32
LINC00550-202ENST00000629570 GRIK5Q16478 980 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 KIF4BQ2VIQ3 1234 aa6.83□□□□□ -1.32
LINC00550-202ENST00000629570 TBC1D10BQ4KMP7 808 aaPredicted RBP6.83□□□□□ -1.32
LINC00550-202ENST00000629570 MFSD14BQ5SR56 506 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms