RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 RAB11FIP3O75154 756 aa25.31■■□□□ 1.64
CIRBP-246ENST00000628979 MECOMQ03112 1051 aa25.31■■□□□ 1.64
CIRBP-246ENST00000628979 CDAN1Q8IWY9 1227 aa25.31■■□□□ 1.64
CIRBP-246ENST00000628979 SLF2Q8IX21 1173 aa25.31■■□□□ 1.64
CIRBP-246ENST00000628979 LRP2BPQ9P2M1 347 aa25.31■■□□□ 1.64
CIRBP-246ENST00000628979 FOXN1O15353 648 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 SLC10A3P09131 477 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 RASAL3Q86YV0 1011 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 CLASRPQ8N2M8 674 aaKnown RBP25.3■■□□□ 1.64
CIRBP-246ENST00000628979 CRBNQ96SW2 442 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 BEGAINQ9BUH8 593 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 SSC5DA1L4H1 1573 aa25.3■■□□□ 1.64
CIRBP-246ENST00000628979 ZAP70P43403 619 aa25.29■■□□□ 1.64
CIRBP-246ENST00000628979 TEPSINQ96N21 525 aa25.29■■□□□ 1.64
CIRBP-246ENST00000628979 THSD7BQ9C0I4 1608 aa25.29■■□□□ 1.64
CIRBP-246ENST00000628979 IFIT2P09913 472 aaKnown RBP25.28■■□□□ 1.64
CIRBP-246ENST00000628979 KIF23Q02241 960 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-246ENST00000628979 TCP10Q12799 353 aa25.28■■□□□ 1.64
CIRBP-246ENST00000628979 AKAP11Q9UKA4 1901 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 USP2O75604 605 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 CYP2E1P05181 493 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 BTDP43251 543 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 IREB2P48200 963 aaKnown RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 GSTO1P78417 241 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 MKRN3Q13064 507 aaKnown RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 FKBP1CQ5VVH2 108 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 FAM83AQ86UY5 434 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 NSUN4Q96CB9 384 aaKnown RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 ZNF512BQ96KM6 892 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-246ENST00000628979 MROH7-TTC4A0A0A0MT08 1334 aa25.27■■□□□ 1.64
CIRBP-246ENST00000628979 LDHCP07864 332 aa25.26■■□□□ 1.63
CIRBP-246ENST00000628979 NFIAQ12857 509 aa25.26■■□□□ 1.63
CIRBP-246ENST00000628979 LDLRAD1Q5T700 205 aa25.26■■□□□ 1.63
CIRBP-246ENST00000628979 NDUFB9Q9Y6M9 179 aa25.26■■□□□ 1.63
CIRBP-246ENST00000628979 GAKO14976 1311 aa25.26■■□□□ 1.63
CIRBP-246ENST00000628979 AK9Q5TCS8 1911 aa25.25■■□□□ 1.63
CIRBP-246ENST00000628979 ZNF384Q8TF68 577 aa25.25■■□□□ 1.63
CIRBP-246ENST00000628979 SLC10A4Q96EP9 437 aa25.25■■□□□ 1.63
CIRBP-246ENST00000628979 FAM163AQ96GL9 167 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-246ENST00000628979 SMARCA5O60264 1052 aaPredicted RBP25.24■■□□□ 1.63
CIRBP-246ENST00000628979 CTCFP49711 727 aaPredicted RBP25.24■■□□□ 1.63
CIRBP-246ENST00000628979 MAP3K11Q16584 847 aa25.24■■□□□ 1.63
CIRBP-246ENST00000628979 FAM151AQ8WW52 585 aa25.24■■□□□ 1.63
CIRBP-246ENST00000628979 CLMNQ96JQ2 1002 aa25.24■■□□□ 1.63
CIRBP-246ENST00000628979 PIH1D3Q9NQM4 214 aaKnown RBP25.24■■□□□ 1.63
CIRBP-246ENST00000628979 PCDHB15Q9Y5E8 787 aa25.24■■□□□ 1.63
CIRBP-246ENST00000628979 LRRCC1Q9C099 1032 aa25.23■■□□□ 1.63
CIRBP-246ENST00000628979 FAM198AQ9UFP1 575 aa25.23■■□□□ 1.63
CIRBP-246ENST00000628979 TSKSQ9UJT2 592 aa25.23■■□□□ 1.63
CIRBP-246ENST00000628979 MYO5AQ9Y4I1 1855 aaKnown RBP25.23■■□□□ 1.63
CIRBP-246ENST00000628979 GPR75-ASB3A0A0A6YYF3 556 aa25.22■■□□□ 1.63
CIRBP-246ENST00000628979 NAA16Q6N069 864 aaPredicted RBP25.22■■□□□ 1.63
CIRBP-246ENST00000628979 RGS3P49796 1198 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 LBX1P52954 281 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 PICALMQ13492 652 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 MIGA2Q7L4E1 593 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 ZFPM1Q8IX07 1006 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 ANKRD13AQ8IZ07 590 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 CSRNP1Q96S65 589 aa25.21■■□□□ 1.63
CIRBP-246ENST00000628979 NOL10Q9BSC4 688 aaKnown RBP25.21■■□□□ 1.63
CIRBP-246ENST00000628979 IDH1O75874 414 aaKnown RBP25.2■■□□□ 1.62
CIRBP-246ENST00000628979 HOOK2Q96ED9 719 aa25.2■■□□□ 1.62
CIRBP-246ENST00000628979 ANTXR1Q9H6X2 564 aa25.2■■□□□ 1.62
CIRBP-246ENST00000628979 DCTPP1Q9H773 170 aa25.2■■□□□ 1.62
CIRBP-246ENST00000628979 HSPA8P11142 646 aaKnown RBP25.19■■□□□ 1.62
CIRBP-246ENST00000628979 COL13A1Q5TAT6 717 aaPredicted RBP25.19■■□□□ 1.62
CIRBP-246ENST00000628979 ZSCAN29Q8IWY8 852 aaPredicted RBP25.19■■□□□ 1.62
CIRBP-246ENST00000628979 IDI2Q9BXS1 227 aa25.19■■□□□ 1.62
CIRBP-246ENST00000628979 ELP3Q9H9T3 547 aa25.19■■□□□ 1.62
CIRBP-246ENST00000628979 MAP3K9P80192 1104 aa25.18■■□□□ 1.62
CIRBP-246ENST00000628979 SPRYD7Q5W111 196 aa25.18■■□□□ 1.62
CIRBP-246ENST00000628979 DCAF15Q66K64 600 aa25.18■■□□□ 1.62
CIRBP-246ENST00000628979 DNAJC2Q99543 621 aaKnown RBP25.18■■□□□ 1.62
CIRBP-246ENST00000628979 AATFQ9NY61 560 aaKnown RBP eCLIP25.18■■□□□ 1.62
CIRBP-246ENST00000628979 ENTPD3O75355 529 aa25.17■■□□□ 1.62
CIRBP-246ENST00000628979 WDHD1O75717 1129 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-246ENST00000628979 RHBDL3P58872 404 aa25.17■■□□□ 1.62
CIRBP-246ENST00000628979 WNK4Q96J92 1243 aa25.17■■□□□ 1.62
CIRBP-246ENST00000628979 DDX4Q9NQI0 724 aaKnown RBP25.17■■□□□ 1.62
CIRBP-246ENST00000628979 SUPT16HQ9Y5B9 1047 aaKnown RBP25.17■■□□□ 1.62
CIRBP-246ENST00000628979 MAST2Q6P0Q8 1798 aa25.17■■□□□ 1.62
CIRBP-246ENST00000628979 RPAP1Q9BWH6 1393 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-246ENST00000628979 OTOFQ9HC10 1997 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 UNCXA6NJT0 531 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 BAG3O95817 575 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 CYP7A1P22680 504 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 TEX11Q8IYF3 940 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 SH3RF3Q8TEJ3 882 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-246ENST00000628979 WRNIP1Q96S55 665 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 ZNF341Q9BYN7 854 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 BOLA2Q9H3K6 86 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 CSADQ9Y600 493 aa25.16■■□□□ 1.62
CIRBP-246ENST00000628979 CA12O43570 354 aa25.15■■□□□ 1.62
CIRBP-246ENST00000628979 TRPA1O75762 1119 aa25.15■■□□□ 1.62
CIRBP-246ENST00000628979 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-246ENST00000628979 ADGRA1Q86SQ6 560 aa25.15■■□□□ 1.62
CIRBP-246ENST00000628979 REM2Q8IYK8 340 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-246ENST00000628979 MAGEB6Q8N7X4 407 aa25.15■■□□□ 1.62
CIRBP-246ENST00000628979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.15■■□□□ 1.627e-15■□□□□ 9.7
CIRBP-246ENST00000628979 RNF186Q9NXI6 227 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms