RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 TESPA1A2RU30 521 aaPredicted RBP14.98□□□□□ -0.01
UBR1-212ENST00000627960 IGF2BP3O00425 579 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBR1-212ENST00000627960 G3BP1Q13283 466 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBR1-212ENST00000627960 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
UBR1-212ENST00000627960 VGLL4Q14135 290 aa14.98□□□□□ -0.01
UBR1-212ENST00000627960 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
UBR1-212ENST00000627960 ZGPATQ8N5A5 531 aaKnown RBP14.98□□□□□ -0.01
UBR1-212ENST00000627960 FAM151AQ8WW52 585 aa14.98□□□□□ -0.01
UBR1-212ENST00000627960 OPTNQ96CV9 577 aa14.98□□□□□ -0.01
UBR1-212ENST00000627960 NEUROD6Q96NK8 337 aa14.98□□□□□ -0.01
UBR1-212ENST00000627960 RPAP1Q9BWH6 1393 aaPredicted RBP14.98□□□□□ -0.01
UBR1-212ENST00000627960 FKTNO75072 461 aa14.97□□□□□ -0.01
UBR1-212ENST00000627960 OTUD7BQ6GQQ9 843 aa14.97□□□□□ -0.01
UBR1-212ENST00000627960 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
UBR1-212ENST00000627960 USP40Q9NVE5 1235 aa14.97□□□□□ -0.01
UBR1-212ENST00000627960 CSADQ9Y600 493 aa14.97□□□□□ -0.01
UBR1-212ENST00000627960 RGS19P49795 217 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 ATP8B2P98198 1209 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 POLA2Q14181 598 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
UBR1-212ENST00000627960 DCAF15Q66K64 600 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
UBR1-212ENST00000627960 SSH3Q8TE77 659 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 PTPN18Q99952 460 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 ABCF2Q9UG63 623 aa14.96□□□□□ -0.01
UBR1-212ENST00000627960 SPDYE5A6NIY4 337 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 ZBTB7BO15156 539 aaPredicted RBP14.95□□□□□ -0.02
UBR1-212ENST00000627960 RLBP1P12271 317 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 TCP10Q12799 353 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 NFIAQ12857 509 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 SPTY2D1Q68D10 685 aaPredicted RBP14.95□□□□□ -0.02
UBR1-212ENST00000627960 ZKSCAN4Q969J2 545 aaPredicted RBP14.95□□□□□ -0.02
UBR1-212ENST00000627960 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
UBR1-212ENST00000627960 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 ZNF341Q9BYN7 854 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 SNCAIPQ9Y6H5 919 aa14.95□□□□□ -0.02
UBR1-212ENST00000627960 GAKO14976 1311 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 GTF2A2P52657 109 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 MIGA2Q7L4E1 593 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 ERO1BQ86YB8 467 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 DZIP1Q86YF9 867 aaKnown RBP14.94□□□□□ -0.02
UBR1-212ENST00000627960 ITPRIPQ8IWB1 547 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 SLF2Q8IX21 1173 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 BRI3BPQ8WY22 251 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 OTUD5Q96G74 571 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 C1orf115Q9H7X2 142 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 HMG20BQ9P0W2 317 aa14.94□□□□□ -0.02
UBR1-212ENST00000627960 CCL15-CCL14A0A0B4J2E2 113 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 ARID4AP29374 1257 aaPredicted RBP14.93□□□□□ -0.02
UBR1-212ENST00000627960 CRHR2Q13324 411 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 CCL15Q16663 113 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 SPATA5Q8NB90 893 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 GPR108Q9NPR9 543 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 ZNF112Q9UJU3 913 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
UBR1-212ENST00000627960 DOCK2Q92608 1830 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 ENTPD3O75355 529 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 SURF6O75683 361 aaKnown RBP14.92□□□□□ -0.02
UBR1-212ENST00000627960 UQCRFS1P1P0C7P4 283 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 RGS3P49796 1198 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 MECOMQ03112 1051 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
UBR1-212ENST00000627960 MROH7-TTC4A0A0A0MT08 1334 aa14.92□□□□□ -0.02
UBR1-212ENST00000627960 CETPP11597 493 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 INPP5BP32019 993 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 BTDP43251 543 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
UBR1-212ENST00000627960 PPIL2Q13356 520 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
UBR1-212ENST00000627960 TNNI3KQ59H18 835 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 FBXO46Q6PJ61 603 aaPredicted RBP14.91□□□□□ -0.02
UBR1-212ENST00000627960 PI16Q6UXB8 463 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 ZNF384Q8TF68 577 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 FPGT-TNNI3KV9GXZ4 949 aa14.91□□□□□ -0.02
UBR1-212ENST00000627960 RFX7Q2KHR2 1363 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 GPR75-ASB3A0A0A6YYF3 556 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 IRF6O14896 467 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 LDHCP07864 332 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 MCAMP43121 646 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 GSTO1P78417 241 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 PPATQ06203 517 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 PANK1Q8TE04 598 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
UBR1-212ENST00000627960 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
UBR1-212ENST00000627960 WDHD1O75717 1129 aaPredicted RBP14.89□□□□□ -0.03
UBR1-212ENST00000627960 RHBDL3P58872 404 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 SP3Q02447 781 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 SNAPC2Q13487 334 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 TAF1CQ15572 869 aaPredicted RBP14.89□□□□□ -0.03
UBR1-212ENST00000627960 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 DBNDD2Q9BQY9 259 aa14.89□□□□□ -0.03
UBR1-212ENST00000627960 ZFYVE28Q9HCC9 887 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms