RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 MROH7-TTC4A0A0A0MT08 1334 aa24.4■■□□□ 1.5
PNKP-219ENST00000626274 HDAC1Q13547 482 aaPredicted RBP24.4■■□□□ 1.5
PNKP-219ENST00000626274 CYP4F22Q6NT55 531 aa24.4■■□□□ 1.5
PNKP-219ENST00000626274 FAM83AQ86UY5 434 aa24.4■■□□□ 1.5
PNKP-219ENST00000626274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.4■■□□□ 1.5
PNKP-219ENST00000626274 USP40Q9NVE5 1235 aa24.4■■□□□ 1.5
PNKP-219ENST00000626274 AK9Q5TCS8 1911 aa24.39■■□□□ 1.5
PNKP-219ENST00000626274 WDR33Q9C0J8 1336 aaKnown RBP24.39■■□□□ 1.5
PNKP-219ENST00000626274 NBPF12Q5TAG4 269 aaPredicted RBP24.39■■□□□ 1.49
PNKP-219ENST00000626274 PIH1D3Q9NQM4 214 aaKnown RBP24.39■■□□□ 1.49
PNKP-219ENST00000626274 DOCK2Q92608 1830 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 GPR75-ASB3A0A0A6YYF3 556 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 BTDP43251 543 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 GRM1Q13255 1194 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 RGMBQ6NW40 437 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 MOB2Q70IA6 237 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 ARMC9Q7Z3E5 817 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 TEPSINQ96N21 525 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 TMEM39BQ9GZU3 492 aa24.38■■□□□ 1.49
PNKP-219ENST00000626274 UBE2Q2LH0YL09 131 aa24.37■■□□□ 1.49
PNKP-219ENST00000626274 ATP5JP18859 108 aa24.37■■□□□ 1.49
PNKP-219ENST00000626274 PRKG1Q13976 671 aa24.37■■□□□ 1.49
PNKP-219ENST00000626274 NAA16Q6N069 864 aaPredicted RBP24.37■■□□□ 1.49
PNKP-219ENST00000626274 NDUFB9Q9Y6M9 179 aa24.37■■□□□ 1.49
PNKP-219ENST00000626274 SSC5DA1L4H1 1573 aa24.37■■□□□ 1.49
PNKP-219ENST00000626274 PPP1R12BO60237 982 aaPredicted RBP24.36■■□□□ 1.49
PNKP-219ENST00000626274 TTF1Q15361 905 aaPredicted RBP24.36■■□□□ 1.49
PNKP-219ENST00000626274 GCC1Q96CN9 775 aa24.36■■□□□ 1.49
PNKP-219ENST00000626274 ANTXR1Q9H6X2 564 aa24.36■■□□□ 1.49
PNKP-219ENST00000626274 ANGEL1Q9UNK9 670 aaKnown RBP24.36■■□□□ 1.49
PNKP-219ENST00000626274 IDH1O75874 414 aaKnown RBP24.35■■□□□ 1.49
PNKP-219ENST00000626274 ZNF157P51786 506 aaPredicted RBP24.35■■□□□ 1.49
PNKP-219ENST00000626274 FAM151AQ8WW52 585 aa24.35■■□□□ 1.49
PNKP-219ENST00000626274 RPAP1Q9BWH6 1393 aaPredicted RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 MAP4K4O95819 1239 aaPredicted RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 MAP3K12Q12852 859 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 NFIAQ12857 509 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 CDAN1Q8IWY9 1227 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 CCDC102AQ96A19 550 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 DNAJC2Q99543 621 aaKnown RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 NOL10Q9BSC4 688 aaKnown RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 IDI2Q9BXS1 227 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 BOLA2Q9H3K6 86 aa24.34■■□□□ 1.49
PNKP-219ENST00000626274 RWDD1Q9H446 243 aaPredicted RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 ZBTB47Q9UFB7 747 aaPredicted RBP24.34■■□□□ 1.49
PNKP-219ENST00000626274 IRX6P78412 446 aaPredicted RBP24.33■■□□□ 1.49
PNKP-219ENST00000626274 TCP10Q12799 353 aa24.33■■□□□ 1.49
PNKP-219ENST00000626274 MAP3K11Q16584 847 aa24.33■■□□□ 1.49
PNKP-219ENST00000626274 GPATCH3Q96I76 525 aa24.33■■□□□ 1.49
PNKP-219ENST00000626274 ECHDC1Q9NTX5 307 aa24.33■■□□□ 1.49
PNKP-219ENST00000626274 FAM198AQ9UFP1 575 aa24.33■■□□□ 1.49
PNKP-219ENST00000626274 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 BAG3O95817 575 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 MAP2K2P36507 400 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 RHBDL3P58872 404 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 LDLRAD1Q5T700 205 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 TMED8Q6PL24 325 aaPredicted RBP24.32■■□□□ 1.48
PNKP-219ENST00000626274 HOOK2Q96ED9 719 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 HAUS7Q99871 368 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 FZD1Q9UP38 647 aa24.32■■□□□ 1.48
PNKP-219ENST00000626274 GOLIM4O00461 696 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 ENTPD3O75355 529 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 USP2O75604 605 aaPredicted RBP24.31■■□□□ 1.48
PNKP-219ENST00000626274 WDHD1O75717 1129 aaPredicted RBP24.31■■□□□ 1.48
PNKP-219ENST00000626274 CYP7A1P22680 504 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 RGS3P49796 1198 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 NOGQ13253 232 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 ANKRD45Q5TZF3 282 aa24.31■■□□□ 1.48
PNKP-219ENST00000626274 RFX7Q2KHR2 1363 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 FAM155AB1AL88 458 aaPredicted RBP24.3■■□□□ 1.48
PNKP-219ENST00000626274 AOC2O75106 756 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 SLC10A3P09131 477 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 IREB2P48200 963 aaKnown RBP24.3■■□□□ 1.48
PNKP-219ENST00000626274 PPP4CP60510 307 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 ADGRA1Q86SQ6 560 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 MAGEB6Q8N7X4 407 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 PAG1Q9NWQ8 432 aa24.3■■□□□ 1.48
PNKP-219ENST00000626274 UNCXA6NJT0 531 aa24.29■■□□□ 1.48
PNKP-219ENST00000626274 PLCG2P16885 1265 aa24.29■■□□□ 1.48
PNKP-219ENST00000626274 RASAL3Q86YV0 1011 aa24.29■■□□□ 1.48
PNKP-219ENST00000626274 EDC3Q96F86 508 aaKnown RBP24.29■■□□□ 1.48
PNKP-219ENST00000626274 AATFQ9NY61 560 aaKnown RBP eCLIP24.29■■□□□ 1.48
PNKP-219ENST00000626274 CDK5RAP2Q96SN8 1893 aa24.29■■□□□ 1.48
PNKP-219ENST00000626274 MYH7P12883 1935 aa24.29■■□□□ 1.48
PNKP-219ENST00000626274 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
PNKP-219ENST00000626274 PICALMQ13492 652 aa24.28■■□□□ 1.48
PNKP-219ENST00000626274 TEX11Q8IYF3 940 aa24.28■■□□□ 1.48
PNKP-219ENST00000626274 OTOFQ9HC10 1997 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 IGHDP01880 384 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 MAP2K1Q02750 393 aaPredicted RBP24.27■■□□□ 1.48
PNKP-219ENST00000626274 DCAF15Q66K64 600 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 ZFPM1Q8IX07 1006 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 SMC5Q8IY18 1101 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 SH3RF3Q8TEJ3 882 aaPredicted RBP24.27■■□□□ 1.48
PNKP-219ENST00000626274 DDX4Q9NQI0 724 aaKnown RBP24.27■■□□□ 1.48
PNKP-219ENST00000626274 TTC41PQ6P2S7 1318 aa24.27■■□□□ 1.48
PNKP-219ENST00000626274 SLC9C2Q5TAH2 1124 aa24.26■■□□□ 1.47
PNKP-219ENST00000626274 ZSCAN29Q8IWY8 852 aaPredicted RBP24.26■■□□□ 1.47
PNKP-219ENST00000626274 ANKRD13AQ8IZ07 590 aa24.26■■□□□ 1.47
PNKP-219ENST00000626274 FOCADQ5VW36 1801 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms