RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LRRIQ3A6PVS8 624 aaPredicted RBP17.33■□□□□ 0.37
PMS1-221ENST00000624204 PES1O00541 588 aaKnown RBP17.33■□□□□ 0.37
PMS1-221ENST00000624204 PPFIA4O75335 1185 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 CTAGE8P0CG41 777 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 CDC27P30260 824 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 CTAGE6Q86UF2 777 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 GPIHBP1Q8IV16 184 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 CTAGE4Q8IX94 777 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.37
PMS1-221ENST00000624204 SALL1Q9NSC2 1324 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 RPS6KA5O75582 802 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 CTAGE9A4FU28 777 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 STX17P56962 302 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 MCTP2Q6DN12 878 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 AIFM3Q96NN9 605 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 GBP3Q9H0R5 595 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.36
PMS1-221ENST00000624204 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
PMS1-221ENST00000624204 FOXN1O15353 648 aa17.32■□□□□ 0.36
PMS1-221ENST00000624204 CHRM1P11229 460 aaPredicted RBP17.32■□□□□ 0.36
PMS1-221ENST00000624204 TFCP2Q12800 502 aa17.32■□□□□ 0.36
PMS1-221ENST00000624204 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
PMS1-221ENST00000624204 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
PMS1-221ENST00000624204 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
PMS1-221ENST00000624204 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
PMS1-221ENST00000624204 RIN2Q8WYP3 895 aaPredicted RBP17.32■□□□□ 0.36
PMS1-221ENST00000624204 GOLIM4O00461 696 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 USP5P45974 858 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 MRPS25P82663 173 aaKnown RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 SLC35F6Q8N357 371 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 C3P01024 1663 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 JCADQ9P266 1359 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 ERLIN2O94905 339 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 ATP5JP18859 108 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 EXOSC10Q01780 885 aaKnown RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 MSANTD4Q8NCY6 345 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 TBX2Q13207 712 aaPredicted RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 RAD9BQ6WBX8 426 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 NOA1Q8NC60 698 aaKnown RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
PMS1-221ENST00000624204 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
PMS1-221ENST00000624204 USP6P35125 1406 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 AKR1B15C9JRZ8 316 aaPredicted RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 CCT5P48643 541 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 SHC4Q6S5L8 630 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 FOXP4Q8IVH2 680 aaPredicted RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.3■□□□□ 0.36
PMS1-221ENST00000624204 A0A087WUV0 522 aaPredicted RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 MED4Q9NPJ6 270 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
PMS1-221ENST00000624204 ADGRG1Q9Y653 693 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 GRAMD1CQ8IYS0 662 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
PMS1-221ENST00000624204 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
PMS1-221ENST00000624204 SLC39A14Q15043 492 aa17.29■□□□□ 0.36
PMS1-221ENST00000624204 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
PMS1-221ENST00000624204 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
PMS1-221ENST00000624204 KIF23Q02241 960 aaPredicted RBP17.29■□□□□ 0.36
PMS1-221ENST00000624204 ANKRD20A12PQ8NF67 263 aa17.29■□□□□ 0.36
PMS1-221ENST00000624204 USP31Q70CQ4 1352 aa17.29■□□□□ 0.36
PMS1-221ENST00000624204 BMP6P22004 513 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
PMS1-221ENST00000624204 FBXW10Q5XX13 1052 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 CXorf56Q9H5V9 222 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 AGLP35573 1532 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
PMS1-221ENST00000624204 HOXC9P31274 260 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 MAP2K2P36507 400 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 CT47A1Q5JQC4 288 aaPredicted RBP17.28■□□□□ 0.36
PMS1-221ENST00000624204 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 GSPT2Q8IYD1 628 aaKnown RBP17.28■□□□□ 0.36
PMS1-221ENST00000624204 ACRBPQ8NEB7 543 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 CAPZA3Q96KX2 299 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
PMS1-221ENST00000624204 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 FAM212AQ96EL1 285 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
PMS1-221ENST00000624204 TEX33O43247 280 aa17.27■□□□□ 0.36
PMS1-221ENST00000624204 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
PMS1-221ENST00000624204 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
PMS1-221ENST00000624204 ABL1P00519 1130 aa17.27■□□□□ 0.36
PMS1-221ENST00000624204 HSPD1P10809 573 aaKnown RBP17.27■□□□□ 0.36
PMS1-221ENST00000624204 RBL2Q08999 1139 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms