RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
LINC00963-217ENST00000624009 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
LINC00963-217ENST00000624009 MOB2Q70IA6 237 aa15.28■□□□□ 0.04
LINC00963-217ENST00000624009 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
LINC00963-217ENST00000624009 DZIP1Q86YF9 867 aaKnown RBP15.28■□□□□ 0.04
LINC00963-217ENST00000624009 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
LINC00963-217ENST00000624009 CSRNP1Q96S65 589 aa15.28■□□□□ 0.04
LINC00963-217ENST00000624009 MYO5AQ9Y4I1 1855 aaKnown RBP15.28■□□□□ 0.04
LINC00963-217ENST00000624009 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 USP2O75604 605 aaPredicted RBP15.27■□□□□ 0.04
LINC00963-217ENST00000624009 MCAMP43121 646 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 TM4SF4P48230 202 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 LBX1P52954 281 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 INHBEP58166 350 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 GSTO1P78417 241 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 CDC42EP5Q6NZY7 148 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 ZIC5Q96T25 663 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 IDI2Q9BXS1 227 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 TMEM39BQ9GZU3 492 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 ABCF2Q9UG63 623 aa15.27■□□□□ 0.04
LINC00963-217ENST00000624009 RAB11FIP3O75154 756 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 LDHCP07864 332 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 SREBF2Q12772 1141 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 IFFO2Q5TF58 517 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 SPRYD7Q5W111 196 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 DBNLQ9UJU6 430 aaKnown RBP15.26■□□□□ 0.03
LINC00963-217ENST00000624009 DOCK2Q92608 1830 aa15.26■□□□□ 0.03
LINC00963-217ENST00000624009 RFX7Q2KHR2 1363 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 FOCADQ5VW36 1801 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 ENTPD3O75355 529 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 NOM1Q5C9Z4 860 aaKnown RBP15.25■□□□□ 0.03
LINC00963-217ENST00000624009 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 DCAF15Q66K64 600 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 SIRT2Q8IXJ6 389 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 NSUN4Q96CB9 384 aaKnown RBP15.25■□□□□ 0.03
LINC00963-217ENST00000624009 EAF2Q96CJ1 260 aaPredicted RBP15.25■□□□□ 0.03
LINC00963-217ENST00000624009 KIF1BPQ96EK5 621 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 CFHR5Q9BXR6 569 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 EXOC6BQ9Y2D4 811 aa15.25■□□□□ 0.03
LINC00963-217ENST00000624009 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
LINC00963-217ENST00000624009 ALDH1A1P00352 501 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 MECOMQ03112 1051 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00963-217ENST00000624009 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 COL2A1P02458 1487 aaPredicted RBP15.24■□□□□ 0.03
LINC00963-217ENST00000624009 CDK5RAP2Q96SN8 1893 aa15.24■□□□□ 0.03
LINC00963-217ENST00000624009 CACNB3P54284 484 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 MAP3K9P80192 1104 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 PRKG1Q13976 671 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 TNS4Q8IZW8 715 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 CLASRPQ8N2M8 674 aaKnown RBP15.23■□□□□ 0.03
LINC00963-217ENST00000624009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC00963-217ENST00000624009 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
LINC00963-217ENST00000624009 PLCG2P16885 1265 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.22■□□□□ 0.03
LINC00963-217ENST00000624009 AACSQ86V21 672 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 CERS3Q8IU89 383 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 ZNF384Q8TF68 577 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 LRP2BPQ9P2M1 347 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 FAM198AQ9UFP1 575 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 CSADQ9Y600 493 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 ATRNL1Q5VV63 1379 aa15.22■□□□□ 0.03
LINC00963-217ENST00000624009 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-217ENST00000624009 BTDP43251 543 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 MAP3K10Q02779 954 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 NFIAQ12857 509 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 CLMNQ96JQ2 1002 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 ZNF341Q9BYN7 854 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 ZNF112Q9UJU3 913 aa15.21■□□□□ 0.03
LINC00963-217ENST00000624009 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-217ENST00000624009 TRPA1O75762 1119 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 CYP2E1P05181 493 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-217ENST00000624009 RGS3P49796 1198 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 RHBDL3P58872 404 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 PPP4CP60510 307 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 VGLL4Q14135 290 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 TBC1D9Q6ZT07 1266 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-217ENST00000624009 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
LINC00963-217ENST00000624009 FZD1Q9UP38 647 aa15.2■□□□□ 0.02
LINC00963-217ENST00000624009 MYH7P12883 1935 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 BAG3O95817 575 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
LINC00963-217ENST00000624009 AAMPQ13685 434 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
LINC00963-217ENST00000624009 NOL9Q5SY16 702 aaKnown RBP15.19■□□□□ 0.02
LINC00963-217ENST00000624009 OTUD7BQ6GQQ9 843 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms