RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 SYT1P21579 422 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 ZNF274Q96GC6 653 aaPredicted RBP10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 ZNF496Q96IT1 587 aaPredicted RBP10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 LRRC2Q9BYS8 371 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 FAM89AQ96GI7 184 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 HAUS7Q99871 368 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 CLSTN2Q9H4D0 955 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 NSFL1CQ9UNZ2 370 aaKnown RBP10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 AGLP35573 1532 aa10.06□□□□□ -0.8
AP000542.3-201ENST00000623391 SSR1P43307 286 aaKnown RBP10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 HOOK3Q86VS8 718 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 TSPYL1Q9H0U9 437 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 PNMA6EA0A0J9YXQ4 647 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 HAUS3Q68CZ6 603 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 CCDC65Q8IXS2 484 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 AOPEPQ8N6M6 819 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 KIF4AO95239 1232 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 CCDC175P0C221 793 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 ATP2B4P23634 1241 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 COPRSQ9NQ92 184 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 NEURL4Q96JN8 1562 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 GALNT17Q6IS24 598 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 WDR17Q8IZU2 1322 aa10.05□□□□□ -0.8
AP000542.3-201ENST00000623391 FAM13AO94988 1023 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 VWA3BQ502W6 1294 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 TCERG1LQ5VWI1 586 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 SV2BQ7L1I2 683 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 DHX58Q96C10 678 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 TACC1O75410 805 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 CNNM4Q6P4Q7 775 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 BICD1Q96G01 975 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 RGS12O14924 1447 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 DNAJC10Q8IXB1 793 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 ZKSCAN5Q9Y2L8 839 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 AFMP43652 599 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 KCNG1Q9UIX4 513 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 USP31Q70CQ4 1352 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 CLCN1P35523 988 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 MYL5Q02045 173 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 PAF1Q8N7H5 531 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 ARMT1Q9H993 441 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 IMPACTQ9P2X3 320 aa10.04□□□□□ -0.8
AP000542.3-201ENST00000623391 HOXA7P31268 230 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 IL6STP40189 918 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 MSANTD4Q8NCY6 345 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 CPLX3Q8WVH0 158 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 H0YIN7 160 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 A1BGP04217 495 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 ZNF445P59923 1031 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 SKILP12757 684 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 DNAJC25Q9H1X3 360 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 USP21Q9UK80 565 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 ERVV-1B6SEH8 477 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 KRT86O43790 486 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 AKR1B10O60218 316 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 MARCKSP29966 332 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 MLKLQ8NB16 471 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 DDAH1O94760 285 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 SPAG5Q96R06 1193 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 NUP58Q9BVL2 599 aa10.03□□□□□ -0.8
AP000542.3-201ENST00000623391 NEK11Q8NG66 645 aa10.02□□□□□ -0.8
AP000542.3-201ENST00000623391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.02□□□□□ -0.8
AP000542.3-201ENST00000623391 CFAP65Q6ZU64 1925 aaKnown RBP10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 RPAP1Q9BWH6 1393 aaPredicted RBP10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 DIP2CQ9Y2E4 1556 aa10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 IFFO1Q0D2I5 559 aa10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 UBE3CQ15386 1083 aa10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 RBM26Q5T8P6 1007 aaKnown RBP10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
AP000542.3-201ENST00000623391 B4E1Z4 1266 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms