RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NRKQ7Z2Y5 1582 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 ZBTB38Q8NAP3 1195 aaPredicted RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 FBXO18Q8NFZ0 1043 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 NLRP3Q96P20 1036 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 CCDC94Q9BW85 323 aaPredicted RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 CEP170BQ9Y4F5 1589 aaPredicted RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 M0R2C6 588 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 ERLIN1O75477 346 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 YEATS4O95619 227 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 PDE6AP16499 860 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 PHKA1P46020 1223 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 NDUFA8P51970 172 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 FAM98CQ17RN3 349 aaKnown RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 SPATA5Q8NB90 893 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 CEP89Q96ST8 783 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 XPO4Q9C0E2 1151 aaKnown RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
MSH6-215ENST00000622629 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.06
MSH6-215ENST00000622629 CTSWP56202 376 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 BCL2L12Q9HB09 334 aa14.68□□□□□ -0.06
MSH6-215ENST00000622629 ADGRB2O60241 1585 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
MSH6-215ENST00000622629 IDEP14735 1019 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 PFKFB1P16118 471 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 KARSQ15046 597 aaKnown RBP14.67□□□□□ -0.06
MSH6-215ENST00000622629 ZNF174Q15697 407 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 CCDC24Q8N4L8 307 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 GJB4Q9NTQ9 266 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
MSH6-215ENST00000622629 TMEM131LA2VDJ0 1609 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 U2AF2P26368 475 aaKnown RBP eCLIP14.67□□□□□ -0.062e-9■■■■■ 28.4
MSH6-215ENST00000622629 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 MCM9Q9NXL9 1143 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
MSH6-215ENST00000622629 FER1L4A9Z1Z3 1794 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 VWA3AA6NCI4 1184 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 C6orf229H3BNL8 230 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 MPHOSPH10O00566 681 aaKnown RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 RESTQ13127 1097 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 RILPL1Q5EBL4 403 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 AXDND1Q5T1B0 1012 aaPredicted RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 C11orf57Q6ZUT1 292 aaPredicted RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 TCP11L1Q9NUJ3 509 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 MCM7P33993 719 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 FAM193AP78312 1265 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 BMP2KQ9NSY1 1161 aaPredicted RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
MSH6-215ENST00000622629 TCEAL9Q9UHQ7 104 aa14.66□□□□□ -0.06
MSH6-215ENST00000622629 PNOCQ13519 176 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 LZTFL1Q9NQ48 299 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 H7C1W4 665 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 NLRP12P59046 1061 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 STAMQ92783 540 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 AK7Q96M32 723 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 PLIN2Q99541 437 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 RCOR1Q9UKL0 485 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 KRT2P35908 639 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 MTIF2P46199 727 aaKnown RBP14.65□□□□□ -0.06
MSH6-215ENST00000622629 ENOX2Q16206 610 aaKnown RBP14.65□□□□□ -0.06
MSH6-215ENST00000622629 AKNAD1Q5T1N1 836 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 HEATR3Q7Z4Q2 680 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 KIAA1524Q8TCG1 905 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 CACTINQ8WUQ7 758 aaKnown RBP14.65□□□□□ -0.06
MSH6-215ENST00000622629 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
MSH6-215ENST00000622629 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 ZBTB1Q9Y2K1 713 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 GOLGA6L9A6NEM1 432 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 DEXIO95424 95 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 BAG3O95817 575 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 TRMT44Q8IYL2 757 aaKnown RBP14.65□□□□□ -0.06
MSH6-215ENST00000622629 SYNE4Q8N205 404 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 TRIM47Q96LD4 638 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 AIFM3Q96NN9 605 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 NFE2L3Q9Y4A8 694 aa14.65□□□□□ -0.06
MSH6-215ENST00000622629 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 BTBD18B2RXH4 712 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 PDE8BO95263 885 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 STAT6P42226 847 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 PGBD1Q96JS3 809 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 CUTAO60888 179 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 BMP15O95972 392 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 TSPY3P0CV98 308 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 TSPY8P0CW00 308 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 BCAMP50895 628 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 BMS1Q14692 1282 aaKnown RBP14.64□□□□□ -0.07
MSH6-215ENST00000622629 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
MSH6-215ENST00000622629 KRT222Q8N1A0 295 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 AK9Q5TCS8 1911 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 IFNL3Q8IZI9 196 aa14.64□□□□□ -0.07
MSH6-215ENST00000622629 TDRD7Q8NHU6 1098 aaKnown RBP14.64□□□□□ -0.07
MSH6-215ENST00000622629 ZNF526Q8TF50 670 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms