RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	USP2	O75604	605 aa	Predicted RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	CIAO1	O76071	339 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	INPP5B	P32019	993 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAP2K2	P36507	400 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	IL15	P40933	162 aa	Predicted RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	MCAM	P43121	646 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	CAP1	Q01518	475 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	VGLL4	Q14135	290 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	SLFNL1	Q499Z3	407 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	SPRYD7	Q5W111	196 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	APOBEC3H	Q6NTF7	200 aa	Known RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	CDC42EP5	Q6NZY7	148 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	DZIP1	Q86YF9	867 aa	Known RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZNF384	Q8TF68	577 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	OPTN	Q96CV9	577 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	SLC10A4	Q96EP9	437 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	EDC3	Q96F86	508 aa	Known RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	TEPSIN	Q96N21	525 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	WRNIP1	Q96S55	665 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	COPRS	Q9NQ92	184 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	DDX4	Q9NQI0	724 aa	Known RBP	5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	PRDM10	Q9NQV6	1147 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	RAI14	Q9P0K7	980 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	HMG20B	Q9P0W2	317 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	SERPINA10	Q9UK55	444 aa		5.52	□□□□□ -1.53
LINC00649-219	ENST00000622171	CHGB	P05060	677 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	BTD	P43251	543 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	IREB2	P48200	963 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	RGS3	P49796	1198 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	DYNLL1	P63167	89 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	MECOM	Q03112	1051 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	EVX2	Q03828	476 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	TNNI3K	Q59H18	835 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	TTC39A	Q5SRH9	613 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	TSHZ3	Q63HK5	1081 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	CEP85	Q6P2H3	762 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	ADGRA1	Q86SQ6	560 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	MTMR14	Q8NCE2	650 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	TBC1D22A	Q8WUA7	517 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	CCDC102A	Q96A19	550 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	PIH1D3	Q9NQM4	214 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	USP40	Q9NVE5	1235 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	TMOD2	Q9NZR1	351 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	FAM198A	Q9UFP1	575 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	SAP30BP	Q9UHR5	308 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	DBNL	Q9UJU6	430 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	RCAN3	Q9UKA8	241 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	SNCAIP	Q9Y6H5	919 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	FPGT-TNNI3K	V9GXZ4	949 aa		5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	DDX60L	Q5H9U9	1706 aa	Known RBP	5.51	□□□□□ -1.53
LINC00649-219	ENST00000622171	CCL15-CCL14	A0A0B4J2E2	113 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	DDTL	A6NHG4	134 aa	Predicted RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	PPP1R12B	O60237	982 aa	Predicted RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZAP70	P43403	619 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	FKBP1A	P62942	108 aa	Known RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ATP8B2	P98198	1209 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	CRHR2	Q13324	411 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	POLA2	Q14181	598 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	CCL15	Q16663	113 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	LDLRAD1	Q5T700	205 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	SH3BP5L	Q7L8J4	393 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	AACS	Q86V21	672 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAPKAPK5	Q8IW41	473 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	FAM43A	Q8N2R8	423 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	MIGA1	Q8NAN2	632 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	SPATA5	Q8NB90	893 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	WDR66	Q8TBY9	1149 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	CD99L2	Q8TCZ2	262 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	BRI3BP	Q8WY22	251 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ARHGAP45	Q92619	1136 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	EAF2	Q96CJ1	260 aa	Predicted RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	HHIPL1	Q96JK4	782 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZDHHC15	Q96MV8	337 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	DNAJC2	Q99543	621 aa	Known RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	PTPN18	Q99952	460 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ARHGAP39	Q9C0H5	1083 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	ANTXR1	Q9H6X2	564 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	GNL3L	Q9NVN8	582 aa	Known RBP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	DENND2A	Q9ULE3	1009 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	LOC285556	D6RIA3	1793 aa		5.5	□□□□□ -1.53
LINC00649-219	ENST00000622171	MROH7-TTC4	A0A0A0MT08	1334 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAST3	O60307	1309 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZBTB7B	O15156	539 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	PEX10	O60683	326 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	WDHD1	O75717	1129 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	IDH1	O75874	414 aa	Known RBP	5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	TNNI2	P48788	182 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	FKBP1B	P68106	108 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	IRX6	P78412	446 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	MTX1	Q13505	466 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	TNFAIP1	Q13829	316 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	MVP	Q14764	893 aa	Known RBP	5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms