RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 USP40Q9NVE5 1235 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 PA2G4Q9UQ80 394 aaKnown RBP11.61□□□□□ -0.55
TARDBP-227ENST00000622057 LRRFIP2Q9Y608 721 aaKnown RBP11.61□□□□□ -0.55
TARDBP-227ENST00000622057 TNRC18O15417 2968 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-227ENST00000622057 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 CIAO1O76071 339 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 LDHBP07195 334 aaKnown RBP11.6□□□□□ -0.55
TARDBP-227ENST00000622057 INPP5BP32019 993 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 IL15P40933 162 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-227ENST00000622057 SNAPC2Q13487 334 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 CDC42EP5Q6NZY7 148 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
TARDBP-227ENST00000622057 TLR2O60603 784 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-227ENST00000622057 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-227ENST00000622057 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-227ENST00000622057 PHKA1P46020 1223 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 TIMM10P62072 90 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 PPATQ06203 517 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 NFIAQ12857 509 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 PPIL2Q13356 520 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 KIF22Q14807 665 aa11.59□□□□□ -0.55
TARDBP-227ENST00000622057 ADORA1P30542 326 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 CCDC102BQ68D86 513 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 NBPF11Q86T75 865 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 ZFPM1Q8IX07 1006 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-227ENST00000622057 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 MEIS3Q99687 375 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 COPRSQ9NQ92 184 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 PTCH2Q9Y6C5 1203 aa11.58□□□□□ -0.56
TARDBP-227ENST00000622057 SEMA3EO15041 775 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
TARDBP-227ENST00000622057 SLC4A8Q2Y0W8 1093 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 SLC9C1Q4G0N8 1177 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 ARHGAP39Q9C0H5 1083 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 ZNF112Q9UJU3 913 aa11.57□□□□□ -0.56
TARDBP-227ENST00000622057 PDHXO00330 501 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 SRGAP3O43295 1099 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 LACTBP83111 547 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-227ENST00000622057 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-227ENST00000622057 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
TARDBP-227ENST00000622057 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 ZNF333Q96JL9 665 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 NEUROD6Q96NK8 337 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 ZCCHC17Q9NP64 241 aaKnown RBP11.56□□□□□ -0.56
TARDBP-227ENST00000622057 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
TARDBP-227ENST00000622057 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
TARDBP-227ENST00000622057 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 GNAI3P08754 354 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 RGS3P49796 1198 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 TFCP2Q12800 502 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 PICALMQ13492 652 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 RASGRF1Q13972 1273 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 C17orf99Q6UX52 265 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 ANKRD23Q86SG2 305 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
TARDBP-227ENST00000622057 XAGE2Q96GT9 111 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
TARDBP-227ENST00000622057 OTOFQ9HC10 1997 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-227ENST00000622057 BTDP43251 543 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 PSMC4P43686 418 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 NOL9Q5SY16 702 aaKnown RBP11.54□□□□□ -0.56
TARDBP-227ENST00000622057 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-227ENST00000622057 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 FRAT1Q92837 279 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-227ENST00000622057 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
TARDBP-227ENST00000622057 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 CXCL11O14625 94 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 IPO8O15397 1037 aaKnown RBP11.53□□□□□ -0.56
TARDBP-227ENST00000622057 ENTPD3O75355 529 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 GNRH1P01148 92 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 HOXD10P28358 340 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 CTGFP29279 349 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 MVPQ14764 893 aaKnown RBP11.53□□□□□ -0.56
TARDBP-227ENST00000622057 GORABQ5T7V8 394 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 PICK1Q9NRD5 415 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
TARDBP-227ENST00000622057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.53□□□□□ -0.56
TARDBP-227ENST00000622057 PDE4DIPQ5VU43 2346 aa11.52□□□□□ -0.57
TARDBP-227ENST00000622057 DDTLA6NHG4 134 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-227ENST00000622057 PHF20L1A8MW92 1017 aa11.52□□□□□ -0.57
TARDBP-227ENST00000622057 BCAR3O75815 825 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms