RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 DZIP1Q86YF9 867 aaKnown RBP9.64□□□□□ -0.87
CPNE3-209ENST00000620393 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 LSG1Q9H089 658 aaKnown RBP9.64□□□□□ -0.87
CPNE3-209ENST00000620393 DLEC1Q9Y238 1755 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 PSMD14O00487 310 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 GPAA1O43292 621 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 EIF6P56537 245 aaKnown RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 HDLBPQ00341 1268 aaKnown RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 CCDC129Q6ZRS4 1044 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 GMLQ99445 158 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 ANO2Q9NQ90 1003 aa9.63□□□□□ -0.87
CPNE3-209ENST00000620393 TTF2Q9UNY4 1162 aaKnown RBP9.63□□□□□ -0.87
CPNE3-209ENST00000620393 MAST3O60307 1309 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 CCDC171Q6TFL3 1326 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 MYO3BQ8WXR4 1341 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 PATL2C9JE40 543 aaKnown RBP9.62□□□□□ -0.87
CPNE3-209ENST00000620393 F8W031 263 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-209ENST00000620393 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 BAG3O95817 575 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 MMP14P50281 582 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 PTH1RQ03431 593 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 KIAA0825Q8IV33 1275 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 MIGA1Q8NAN2 632 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 AGBL3Q8NEM8 1001 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 RIOK1Q9BRS2 568 aaKnown RBP9.62□□□□□ -0.87
CPNE3-209ENST00000620393 C22orf23Q9BZE7 217 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
CPNE3-209ENST00000620393 GAKO14976 1311 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 AKAP11Q9UKA4 1901 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 MBD4O95243 580 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
CPNE3-209ENST00000620393 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
CPNE3-209ENST00000620393 GNAT2P19087 354 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 DYNLL1P63167 89 aaKnown RBP9.61□□□□□ -0.87
CPNE3-209ENST00000620393 VPS53Q5VIR6 699 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 DPF2Q92785 391 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 DSCC1Q9BVC3 393 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 TMEM106CQ9BVX2 250 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
CPNE3-209ENST00000620393 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
CPNE3-209ENST00000620393 MROH7-TTC4A0A0A0MT08 1334 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 CRKP46108 304 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 SCNN1DP51172 638 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 ALX1Q15699 326 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 APOBEC3HQ6NTF7 200 aaKnown RBP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 LCORLQ8N3X6 602 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 ZDHHC15Q96MV8 337 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 AATFQ9NY61 560 aaKnown RBP eCLIP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 RNF181Q9P0P0 153 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 HDAC9Q9UKV0 1011 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 DAGLAQ9Y4D2 1042 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 COL4A5P29400 1685 aa9.6□□□□□ -0.87
CPNE3-209ENST00000620393 RPAP1Q9BWH6 1393 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-209ENST00000620393 GSG1L2A8MUP6 293 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 FOXP2O15409 715 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 PRKAB2O43741 272 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 FGAP02671 866 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 APPP05067 770 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 PLCG2P16885 1265 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 MCCP23508 829 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 HSPA4P34932 840 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 BTDP43251 543 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 RHBDL3P58872 404 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 GIMAP6Q6P9H5 292 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 KCNB2Q92953 911 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
CPNE3-209ENST00000620393 CTNNA3Q9UI47 895 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 PCDHB8Q9UN66 801 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
CPNE3-209ENST00000620393 SLC4A4Q9Y6R1 1079 aa9.59□□□□□ -0.87
CPNE3-209ENST00000620393 BRCA1P38398 1863 aaKnown RBP9.59□□□□□ -0.87
CPNE3-209ENST00000620393 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 GMPSP49915 693 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 RBM5P52756 815 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 CFAP100Q494V2 611 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 IFNL3Q8IZI9 196 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms