RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 A0A1W2PQ64 194 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 A0A1W2PQD8 194 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 ZBTB43O43298 467 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 WDHD1O75717 1129 aaPredicted RBP13.02□□□□□ -0.33
TP53-223ENST00000618944 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.33
TP53-223ENST00000618944 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
TP53-223ENST00000618944 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 UTP14AQ9BVJ6 771 aaKnown RBP13.02□□□□□ -0.33
TP53-223ENST00000618944 SPEF2Q9C093 1822 aa13.02□□□□□ -0.33
TP53-223ENST00000618944 IFIT3O14879 490 aaKnown RBP13.01□□□□□ -0.33
TP53-223ENST00000618944 ZNF202O95125 648 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 YEATS4O95619 227 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
TP53-223ENST00000618944 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
TP53-223ENST00000618944 KRT40Q6A162 431 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 CEP57L1Q8IYX8 460 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 DPCR1Q3MIW9 517 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 VPS37DQ86XT2 251 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 C16orf45Q96MC5 204 aaPredicted RBP13.01□□□□□ -0.33
TP53-223ENST00000618944 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
TP53-223ENST00000618944 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
TP53-223ENST00000618944 WTIPA6NIX2 430 aaPredicted RBP13□□□□□ -0.33
TP53-223ENST00000618944 GOLGA8AA7E2F4 631 aa13□□□□□ -0.33
TP53-223ENST00000618944 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
TP53-223ENST00000618944 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
TP53-223ENST00000618944 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
TP53-223ENST00000618944 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
TP53-223ENST00000618944 DISP2A7MBM2 1401 aa13□□□□□ -0.33
TP53-223ENST00000618944 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
TP53-223ENST00000618944 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 CDKL5O76039 1030 aa13□□□□□ -0.33
TP53-223ENST00000618944 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 PFKFB1P16118 471 aa13□□□□□ -0.33
TP53-223ENST00000618944 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 SARM1Q6SZW1 724 aa13□□□□□ -0.33
TP53-223ENST00000618944 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 LCORLQ8N3X6 602 aa13□□□□□ -0.33
TP53-223ENST00000618944 TMEM87BQ96K49 555 aa13□□□□□ -0.33
TP53-223ENST00000618944 NAT10Q9H0A0 1025 aaKnown RBP13□□□□□ -0.33
TP53-223ENST00000618944 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
TP53-223ENST00000618944 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
TP53-223ENST00000618944 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 TDO2P48775 406 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 CHAF1AQ13111 956 aaPredicted RBP12.99□□□□□ -0.33
TP53-223ENST00000618944 ITPK1Q13572 414 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 LRP2BPQ9P2M1 347 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 CDC25BP30305 580 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 IGHMBP2P38935 993 aaKnown RBP12.99□□□□□ -0.33
TP53-223ENST00000618944 NTRK3Q16288 839 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 DDB1Q16531 1140 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
TP53-223ENST00000618944 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 CMA1P23946 247 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 SIK1P57059 783 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 TRIM29Q14134 588 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 ALX1Q15699 326 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
TP53-223ENST00000618944 CCDC152Q4G0S7 254 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
TP53-223ENST00000618944 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
TP53-223ENST00000618944 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
TP53-223ENST00000618944 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SLIT2O94813 1529 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SYKP43405 635 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 KCNQ4P56696 695 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 CHRNDQ07001 517 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
TP53-223ENST00000618944 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 LRP6O75581 1613 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 ATRNO75882 1429 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 ITGB4P16144 1822 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 MINDY4BA8MYZ0 360 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SKILP12757 684 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 TNNT1P13805 278 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SHC4Q6S5L8 630 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
TP53-223ENST00000618944 ZNF592Q92610 1267 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms