RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CCDC88AQ3V6T2 1871 aa19.4■□□□□ 0.7
SNAP47-213ENST00000617596 MAST2Q6P0Q8 1798 aa19.4■□□□□ 0.7
SNAP47-213ENST00000617596 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.7
SNAP47-213ENST00000617596 LDHCP07864 332 aa19.39■□□□□ 0.7
SNAP47-213ENST00000617596 VIL1P09327 827 aaKnown RBP19.39■□□□□ 0.7
SNAP47-213ENST00000617596 COL9A3Q14050 684 aaPredicted RBP19.39■□□□□ 0.7
SNAP47-213ENST00000617596 ADCK5Q3MIX3 580 aa19.39■□□□□ 0.7
SNAP47-213ENST00000617596 IFNL3Q8IZI9 196 aa19.39■□□□□ 0.7
SNAP47-213ENST00000617596 ZNF646O15015 1829 aaPredicted RBP19.39■□□□□ 0.69
SNAP47-213ENST00000617596 FKBP1AP62942 108 aaKnown RBP19.39■□□□□ 0.69
SNAP47-213ENST00000617596 GAKO14976 1311 aa19.38■□□□□ 0.69
SNAP47-213ENST00000617596 GPR75-ASB3A0A0A6YYF3 556 aa19.38■□□□□ 0.69
SNAP47-213ENST00000617596 CRKP46108 304 aa19.38■□□□□ 0.69
SNAP47-213ENST00000617596 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNAP47-213ENST00000617596 CIAPIN1Q6FI81 312 aa19.38■□□□□ 0.69
SNAP47-213ENST00000617596 BAG3O95817 575 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 GNAT2P19087 354 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 LMNB1P20700 586 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 GPR162Q16538 588 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 SLC4A8Q2Y0W8 1093 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 UPF3BQ9BZI7 483 aaKnown RBP19.37■□□□□ 0.69
SNAP47-213ENST00000617596 MYH2Q9UKX2 1941 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 SMIM22K7EJ46 135 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 CPA1P15085 419 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 TDO2P48775 406 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 GLIPR1L2Q4G1C9 344 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 SLF2Q8IX21 1173 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 FAM163AQ96GL9 167 aaPredicted RBP19.37■□□□□ 0.69
SNAP47-213ENST00000617596 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
SNAP47-213ENST00000617596 NAPBQ9H115 298 aa19.37■□□□□ 0.69
SNAP47-213ENST00000617596 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 SHTN1A0MZ66 631 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 ZKSCAN1P17029 563 aaPredicted RBP19.36■□□□□ 0.69
SNAP47-213ENST00000617596 RHBDL3P58872 404 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 PPP4CP60510 307 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 EVX2Q03828 476 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 RNF20Q5VTR2 975 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 KCNB2Q92953 911 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 GMLQ99445 158 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 CRNKL1Q9BZJ0 848 aaKnown RBP19.36■□□□□ 0.69
SNAP47-213ENST00000617596 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
SNAP47-213ENST00000617596 FZD9O00144 591 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 IGSF3O75054 1194 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 ANAPC15P60006 121 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 APOBEC3HQ6NTF7 200 aaKnown RBP19.35■□□□□ 0.69
SNAP47-213ENST00000617596 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
SNAP47-213ENST00000617596 STOX1Q6ZVD7 989 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 TGFBRAP1Q8WUH2 860 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
SNAP47-213ENST00000617596 CYP2D7A0A087X1C5 515 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
SNAP47-213ENST00000617596 HHIPL2Q6UWX4 724 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 NACAP1Q9BZK3 213 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
SNAP47-213ENST00000617596 CTNNA3Q9UI47 895 aa19.35■□□□□ 0.69
SNAP47-213ENST00000617596 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
SNAP47-213ENST00000617596 IMMTQ16891 758 aaKnown RBP19.34■□□□□ 0.69
SNAP47-213ENST00000617596 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
SNAP47-213ENST00000617596 TEX11Q8IYF3 940 aa19.34■□□□□ 0.69
SNAP47-213ENST00000617596 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
SNAP47-213ENST00000617596 RNF181Q9P0P0 153 aa19.34■□□□□ 0.69
SNAP47-213ENST00000617596 ZNF213O14771 459 aa19.33■□□□□ 0.69
SNAP47-213ENST00000617596 USP5P45974 858 aa19.33■□□□□ 0.69
SNAP47-213ENST00000617596 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.69
SNAP47-213ENST00000617596 MYO3BQ8WXR4 1341 aa19.33■□□□□ 0.69
SNAP47-213ENST00000617596 MINDY4BA8MYZ0 360 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 CASTP20810 708 aaKnown RBP19.33■□□□□ 0.68
SNAP47-213ENST00000617596 NEK4P51957 841 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 CACNB3P54284 484 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 TNIP1Q15025 636 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 ALX1Q15699 326 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 CFAP100Q494V2 611 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 CDC42EP5Q6NZY7 148 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 TBC1D10CQ8IV04 446 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 ZDHHC15Q96MV8 337 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 USP40Q9NVE5 1235 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.68
SNAP47-213ENST00000617596 USP17L12C9JPN9 530 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 USP17L21D6R901 530 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 USP17L8P0C7I0 530 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 CYP2D6P10635 497 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 RABEP1Q15276 862 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
SNAP47-213ENST00000617596 AGBL3Q8NEM8 1001 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 PRMT6Q96LA8 375 aaPredicted RBP19.32■□□□□ 0.68
SNAP47-213ENST00000617596 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
SNAP47-213ENST00000617596 PSME4Q14997 1843 aa19.32■□□□□ 0.68
SNAP47-213ENST00000617596 E7EWF7 191 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 GMPSP49915 693 aaPredicted RBP19.31■□□□□ 0.68
SNAP47-213ENST00000617596 PICALMQ13492 652 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 C9orf131Q5VYM1 1079 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 CTR9Q6PD62 1173 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 OGFOD1Q8N543 542 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
SNAP47-213ENST00000617596 TCEANC2Q96MN5 208 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms