RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 LRRC14Q15048 493 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 BRDTQ58F21 947 aaPredicted RBP6.85□□□□□ -1.31
RFC3-203ENST00000616236 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
RFC3-203ENST00000616236 ZSWIM2Q8NEG5 633 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 STK35Q8TDR2 534 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 MORC4Q8TE76 937 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 GAL3ST3Q96A11 431 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 CCDC136Q96JN2 1154 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 ANTXR1Q9H6X2 564 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 CBX8Q9HC52 389 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 EID1Q9Y6B2 187 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 ATE1O95260 518 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 MYCLP1P12525 358 aaPredicted RBP6.84□□□□□ -1.31
RFC3-203ENST00000616236 PTPN11Q06124 597 aaPredicted RBP6.84□□□□□ -1.31
RFC3-203ENST00000616236 TM4SF20Q53R12 229 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 LLGL2Q6P1M3 1020 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 THNSL2Q86YJ6 484 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 SULF2Q8IWU5 870 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
RFC3-203ENST00000616236 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 BHMTQ93088 406 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 ZNF669Q96BR6 464 aaPredicted RBP6.84□□□□□ -1.31
RFC3-203ENST00000616236 MFSD3Q96ES6 412 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 PBX4Q9BYU1 374 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 CLEC4MQ9H2X3 399 aaPredicted RBP6.84□□□□□ -1.31
RFC3-203ENST00000616236 TCEAL9Q9UHQ7 104 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 PCDHGC4Q9Y5F7 938 aa6.84□□□□□ -1.31
RFC3-203ENST00000616236 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 J3QW42 95 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
RFC3-203ENST00000616236 ARNTP27540 789 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 NRLP54845 237 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 ATP11AP98196 1134 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 EXOSC10Q01780 885 aaKnown RBP6.83□□□□□ -1.32
RFC3-203ENST00000616236 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
RFC3-203ENST00000616236 TNP2Q05952 138 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 TMEM67Q5HYA8 995 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 DDX42Q86XP3 938 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFC3-203ENST00000616236 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
RFC3-203ENST00000616236 NIM1KQ8IY84 436 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 PMM1Q92871 262 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 NINJ1Q92982 152 aa6.83□□□□□ -1.32
RFC3-203ENST00000616236 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 PRC1O43663 620 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 GUCY2CP25092 1073 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 STAT3P40763 770 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 SIK1P57059 783 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 MLLT1Q03111 559 aaPredicted RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 PCDH1Q08174 1060 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 FAM50AQ14320 339 aaKnown RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 ZNF423Q2M1K9 1284 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 MRPL14Q6P1L8 145 aaKnown RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 EEPD1Q7L9B9 569 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 FAM9AQ8IZU1 332 aaPredicted RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 ZSCAN1Q8NBB4 408 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 SLC30A3Q99726 388 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 TM9SF2Q99805 663 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
RFC3-203ENST00000616236 GEMIN8Q9NWZ8 242 aaKnown RBP6.82□□□□□ -1.32
RFC3-203ENST00000616236 SOS2Q07890 1332 aaPredicted RBP6.81□□□□□ -1.32
RFC3-203ENST00000616236 A0A087X0B3 334 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 ZBTB42B2RXF5 422 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 B3GALT4O96024 378 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 THBS1P07996 1170 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
RFC3-203ENST00000616236 NFKB2Q00653 900 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 LAMC2Q13753 1193 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
RFC3-203ENST00000616236 HGSNATQ68CP4 663 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.81□□□□□ -1.32
RFC3-203ENST00000616236 UBR7Q8N806 425 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 BSNDQ8WZ55 320 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 TSR2Q969E8 191 aaKnown RBP6.81□□□□□ -1.32
RFC3-203ENST00000616236 C8orf48Q96LL4 319 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 CAAP1Q9H8G2 361 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 EFCC1Q9HA90 598 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 HCN2Q9UL51 889 aa6.81□□□□□ -1.32
RFC3-203ENST00000616236 ADCY3O60266 1144 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 CDK8P49336 464 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.328e-8■□□□□ 10.9
RFC3-203ENST00000616236 LBRQ14739 615 aaKnown RBP6.8□□□□□ -1.32
RFC3-203ENST00000616236 LRRFIP1Q32MZ4 808 aaKnown RBP6.8□□□□□ -1.32
RFC3-203ENST00000616236 CT47A1Q5JQC4 288 aaPredicted RBP6.8□□□□□ -1.32
RFC3-203ENST00000616236 PERM1Q5SV97 790 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 WDR75Q8IWA0 830 aaKnown RBP6.8□□□□□ -1.32
RFC3-203ENST00000616236 ZBTB38Q8NAP3 1195 aaPredicted RBP6.8□□□□□ -1.32
RFC3-203ENST00000616236 SLC26A8Q96RN1 970 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
RFC3-203ENST00000616236 MEIS3P2A8K0S8 358 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 PDE8AO60658 829 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 SOX5P35711 763 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms