RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLU7O95391 586 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 IFNAR1P17181 557 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SIK1P57059 783 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPAG1Q07617 926 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 DPCR1Q3MIW9 517 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 PPP4R3BQ5MIZ7 849 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 FANCBQ8NB91 859 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 BCAMP50895 628 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 EIF5P55010 431 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 KIF23Q02241 960 aaPredicted RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPECC1Q5M775 1068 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 TMCO3Q6UWJ1 677 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 IQUBQ8NA54 791 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SETDB2Q96T68 719 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZSWIM4Q9H7M6 989 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF287Q9HBT7 754 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 CABP5Q9NP86 173 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 DEXIO95424 95 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 BAG3O95817 575 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 HLFQ16534 295 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC24Q8N4L8 307 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 KCNB2Q92953 911 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 STRBPQ96SI9 672 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SEC31BQ9NQW1 1179 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 POLR3EQ9NVU0 708 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF215Q9UL58 517 aaPredicted RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 LIFRP42702 1097 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 NDUFA8P51970 172 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 FANCCQ00597 558 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 COL9A3Q14050 684 aaPredicted RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF827Q17R98 1081 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SLC4A8Q2Y0W8 1093 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF654Q8IZM8 581 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 PRDM10Q9NQV6 1147 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 WWC3Q9ULE0 1092 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPDYE4A6NLX3 237 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ETF1P62495 437 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 NOSTRINQ8IVI9 506 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 SMARCC2Q8TAQ2 1214 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 MED23Q9ULK4 1368 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 DEPDC5O75140 1603 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 GYG1P46976 350 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 RASGRF1Q13972 1273 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 STAMQ92783 540 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 UTYO14607 1347 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 MCAMP43121 646 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 GNAQP50148 359 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 TCP11L1Q9NUJ3 509 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 TNKSO95271 1327 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 POLR2DO15514 142 aaKnown RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 CUTAO60888 179 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 IGSF3O75054 1194 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 IKQ13123 557 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 PPP2R5BQ15173 497 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 C11orf57Q6ZUT1 292 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 CDCA7Q9BWT1 371 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 BCL2L12Q9HB09 334 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 MAGEB6P1A0A0J9YX57 407 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 CTDSPL2Q05D32 466 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 SAMD1Q6SPF0 538 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 SYT10Q6XYQ8 523 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 MLKLQ8NB16 471 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 BMP2KQ9NSY1 1161 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZSWIM5Q9P217 1185 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 MAGEC2Q9UBF1 373 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 CDC42BPGQ6DT37 1551 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 KAT14Q9H8E8 782 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 POLR1AO95602 1720 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF335Q9H4Z2 1342 aaPredicted RBP6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 C1orf167Q5SNV9 1468 aa6.44□□□□□ -1.38
SYNCRIP-204ENST00000616122 PATL2C9JE40 543 aaKnown RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 PRKAB2O43741 272 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CALML3P27482 149 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 ADD2P35612 726 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 EXOSC10Q01780 885 aaKnown RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CMTR1Q8N1G2 835 aaKnown RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 GOLGA6L1Q8N7Z2 621 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 SDR42E1Q8WUS8 393 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 MROH5Q6ZUA9 1318 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CEP152O94986 1710 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 A0A0U1RQG5 324 aaPredicted RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 GOLGA6L9A6NEM1 432 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 UBE2Q2Q8WVN8 375 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 QRICH2Q9H0J4 1663 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CLIC6Q96NY7 704 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CLIC4Q9Y696 253 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPATA31D1Q6ZQQ2 1576 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CARMIL3Q8ND23 1372 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 VWA3AA6NCI4 1184 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 TUBB4AP04350 444 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 NR5A1Q13285 461 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPTY2D1Q68D10 685 aaPredicted RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 PIH1D3Q9NQM4 214 aaKnown RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 FANCLQ9NW38 375 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 VPS54Q9P1Q0 977 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 ARHGAP6O43182 974 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms