RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 ADD1P35611 737 aaKnown RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 DEXIO95424 95 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 TPTE2Q6XPS3 522 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 AK7Q96M32 723 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 PUS7LQ9H0K6 701 aaKnown RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 DIS3L2Q8IYB7 885 aaKnown RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 FBXO18Q8NFZ0 1043 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 ALDH8A1Q9H2A2 487 aaPredicted RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 IFNL3Q8IZI9 196 aa16.09■□□□□ 0.17
SSBP2-220ENST00000615665 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
SSBP2-220ENST00000615665 AFMP43652 599 aa16.08■□□□□ 0.17
SSBP2-220ENST00000615665 KLHL34Q8N239 644 aa16.08■□□□□ 0.17
SSBP2-220ENST00000615665 UBXN4Q92575 508 aa16.08■□□□□ 0.17
SSBP2-220ENST00000615665 ZNHIT6Q9NWK9 470 aaKnown RBP16.08■□□□□ 0.17
SSBP2-220ENST00000615665 ZMYM6O95789 1325 aa16.08■□□□□ 0.17
SSBP2-220ENST00000615665 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 MED23Q9ULK4 1368 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 ADD2P35612 726 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 TEX35Q5T0J7 233 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 ATG9AQ7Z3C6 839 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 NOC3LQ8WTT2 800 aaKnown RBP16.08■□□□□ 0.16
SSBP2-220ENST00000615665 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
SSBP2-220ENST00000615665 KRT2P35908 639 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
SSBP2-220ENST00000615665 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
SSBP2-220ENST00000615665 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 CUTAO60888 179 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
SSBP2-220ENST00000615665 GSTO1P78417 241 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 MYL5Q02045 173 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 DHX58Q96C10 678 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 C8orf37Q96NL8 207 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.164e-11■■■■■ 28.4
SSBP2-220ENST00000615665 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 CABP5Q9NP86 173 aa16.07■□□□□ 0.16
SSBP2-220ENST00000615665 BCAMP50895 628 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 HLFQ16534 295 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 CLSTN1O94985 981 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
SSBP2-220ENST00000615665 ZNF609O15014 1411 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
SSBP2-220ENST00000615665 RBM28Q9NW13 759 aaKnown RBP16.06■□□□□ 0.16
SSBP2-220ENST00000615665 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
SSBP2-220ENST00000615665 TOM1O60784 492 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 PRDM1O75626 825 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 NLRP12P59046 1061 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 KIAA1468Q9P260 1216 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 TSPY3P0CV98 308 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 TSPY8P0CW00 308 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 LOC102724428A0A0B4J2F2 783 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 CRKLP46109 303 aaKnown RBP16.05■□□□□ 0.16
SSBP2-220ENST00000615665 SIK1P57059 783 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
SSBP2-220ENST00000615665 JAG2Q9Y219 1238 aa16.05■□□□□ 0.16
SSBP2-220ENST00000615665 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 CHGBP05060 677 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 PFKFB1P16118 471 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 UBA7P41226 1012 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 KCNJ14Q9UNX9 436 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 GNPATO15228 680 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 MCAMP43121 646 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 GNAQP50148 359 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 MYRIPQ8NFW9 859 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 MEGF6O75095 1541 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 ERICH4A6NGS2 130 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 HIBADHP31937 336 aaKnown RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 A0A1W2PQ27 194 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 A0A1W2PQ64 194 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 A0A1W2PQD8 194 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms