RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 BCAMP50895 628 aa13.83□□□□□ -0.2
SLIRP-212ENST00000613856 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
SLIRP-212ENST00000613856 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
SLIRP-212ENST00000613856 DNAJC2Q99543 621 aaKnown RBP13.83□□□□□ -0.2
SLIRP-212ENST00000613856 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 GOLIM4O00461 696 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 VIL1P09327 827 aaKnown RBP13.82□□□□□ -0.2
SLIRP-212ENST00000613856 RPS12P25398 132 aaKnown RBP13.82□□□□□ -0.2
SLIRP-212ENST00000613856 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
SLIRP-212ENST00000613856 GYG1P46976 350 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 TTF1Q15361 905 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-212ENST00000613856 ZNF804AQ7Z570 1209 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 SPATA5Q8NB90 893 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 FSD1Q9BTV5 496 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
SLIRP-212ENST00000613856 ZAP70P43403 619 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 TXNRD3Q86VQ6 643 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
SLIRP-212ENST00000613856 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 DENND2AQ9ULE3 1009 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 RAD50Q92878 1312 aa13.81□□□□□ -0.2
SLIRP-212ENST00000613856 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-212ENST00000613856 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
SLIRP-212ENST00000613856 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 EYA3Q99504 573 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 ESYT1Q9BSJ8 1104 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 MXD3Q9BW11 206 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 SNRKQ9NRH2 765 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
SLIRP-212ENST00000613856 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 GPR25O00155 361 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 IGSF3O75054 1194 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-212ENST00000613856 ZFYP08048 801 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-212ENST00000613856 IL1R1P14778 569 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 TDRD7Q8NHU6 1098 aaKnown RBP13.79□□□□□ -0.2
SLIRP-212ENST00000613856 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 GMLQ99445 158 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 ANTXR1Q9H6X2 564 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
SLIRP-212ENST00000613856 SEC24BO95487 1268 aa13.78□□□□□ -0.2
SLIRP-212ENST00000613856 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
SLIRP-212ENST00000613856 HABP4Q5JVS0 413 aaKnown RBP13.78□□□□□ -0.2
SLIRP-212ENST00000613856 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-212ENST00000613856 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
SLIRP-212ENST00000613856 CD209Q9NNX6 404 aa13.78□□□□□ -0.2
SLIRP-212ENST00000613856 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
SLIRP-212ENST00000613856 SGSM2O43147 1006 aa13.77□□□□□ -0.21
SLIRP-212ENST00000613856 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 REC8O95072 547 aa13.77□□□□□ -0.21
SLIRP-212ENST00000613856 ZSCAN25Q6NSZ9 544 aa13.77□□□□□ -0.21
SLIRP-212ENST00000613856 FBXO46Q6PJ61 603 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
SLIRP-212ENST00000613856 PIH1D3Q9NQM4 214 aaKnown RBP13.77□□□□□ -0.21
SLIRP-212ENST00000613856 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 FAM205AQ6ZU69 1335 aa13.76□□□□□ -0.21
SLIRP-212ENST00000613856 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 PRKG1Q13976 671 aa13.76□□□□□ -0.21
SLIRP-212ENST00000613856 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-212ENST00000613856 A0A0D9SFI3 127 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-212ENST00000613856 ADD2P35612 726 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 TM4SF4P48230 202 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 CAP1Q01518 475 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 MAP3K12Q12852 859 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
SLIRP-212ENST00000613856 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
SLIRP-212ENST00000613856 WDR66Q8TBY9 1149 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 FAM227BQ96M60 508 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 HELLSQ9NRZ9 838 aa13.75□□□□□ -0.21
SLIRP-212ENST00000613856 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
SLIRP-212ENST00000613856 USP17L8P0C7I0 530 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 PDE6AP16499 860 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 FKBP1BP68106 108 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 TTLL12Q14166 644 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-212ENST00000613856 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 APPBP2Q92624 585 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 IL25Q9H293 177 aa13.74□□□□□ -0.21
SLIRP-212ENST00000613856 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-212ENST00000613856 KIAA0100Q14667 2235 aaKnown RBP13.74□□□□□ -0.21
SLIRP-212ENST00000613856 LAMB1P07942 1786 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 MAST3O60307 1309 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 PITPNM2Q9BZ72 1349 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 MYH2Q9UKX2 1941 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 TCRBV5S4A2TA0A5A2 114 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 G3V3G9 751 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms