RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	DAGLA	Q9Y4D2	1042 aa		13.87	□□□□□ -0.19
CBWD1-222	ENST00000613508	LRRFIP2	Q9Y608	721 aa	Known RBP	13.87	□□□□□ -0.19
CBWD1-222	ENST00000613508	CETP	P11597	493 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	PPIL2	Q13356	520 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	MTX1	Q13505	466 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	CD99L2	Q8TCZ2	262 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	ARMC5	Q96C12	935 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	OTUD5	Q96G74	571 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	WRNIP1	Q96S55	665 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	SIL1	Q9H173	461 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	EFCC1	Q9HA90	598 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	ZNF112	Q9UJU3	913 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	DENND2A	Q9ULE3	1009 aa		13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	PDS5A	Q29RF7	1337 aa	Known RBP	13.86	□□□□□ -0.19
CBWD1-222	ENST00000613508	LDHB	P07195	334 aa	Known RBP	13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	PRDX5	P30044	214 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	SNAPC2	Q13487	334 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	DIXDC1	Q155Q3	683 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	PRPF38B	Q5VTL8	546 aa	Known RBP	13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	CDC42EP5	Q6NZY7	148 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	FAM43A	Q8N2R8	423 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	MEIS3	Q99687	375 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	ZNF341	Q9BYN7	854 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	ZFYVE28	Q9HCC9	887 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	MYH13	Q9UKX3	1938 aa		13.85	□□□□□ -0.19
CBWD1-222	ENST00000613508	IRF6	O14896	467 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	GNAI3	P08754	354 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	PHKA1	P46020	1223 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	CAP1	Q01518	475 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	PPAT	Q06203	517 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	ARHGEF6	Q15052	776 aa		13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	TAF1C	Q15572	869 aa	Predicted RBP	13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	ZGPAT	Q8N5A5	531 aa	Known RBP	13.84	□□□□□ -0.19
CBWD1-222	ENST00000613508	WDHD1	O75717	1129 aa	Predicted RBP	13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	NFIA	Q12857	509 aa		13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	CCDC102B	Q68D86	513 aa		13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	FAM163A	Q96GL9	167 aa	Predicted RBP	13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	FAM198A	Q9UFP1	575 aa		13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	PA2G4	Q9UQ80	394 aa	Known RBP	13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	GAK	O14976	1311 aa		13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.83	□□□□□ -0.2
CBWD1-222	ENST00000613508	BTBD19	C9JJ37	291 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	TLR2	O60603	784 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	NOL9	Q5SY16	702 aa	Known RBP	13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	MIGA2	Q7L4E1	593 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	IDI2	Q9BXS1	227 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	KCNH4	Q9UQ05	1017 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	RFX7	Q2KHR2	1363 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	ATRNL1	Q5VV63	1379 aa		13.82	□□□□□ -0.2
CBWD1-222	ENST00000613508	IPO8	O15397	1037 aa	Known RBP	13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	SRGAP3	O43295	1099 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	ENTPD3	O75355	529 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	GNRH1	P01148	92 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	ADORA1	P30542	326 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	INPP5B	P32019	993 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	MAP3K10	Q02779	954 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	RASGRF1	Q13972	1273 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	USP40	Q9NVE5	1235 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	AKAP2	Q9Y2D5	859 aa		13.81	□□□□□ -0.2
CBWD1-222	ENST00000613508	POTEF	A5A3E0	1075 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	TRIM27	P14373	513 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	TIMM10	P62072	90 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	LACTB	P83111	547 aa	Predicted RBP	13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	TCP10	Q12799	353 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	MVP	Q14764	893 aa	Known RBP	13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	ANKRD23	Q86SG2	305 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	SLF2	Q8IX21	1173 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508	ZNF333	Q96JL9	665 aa		13.8	□□□□□ -0.2
CBWD1-222	ENST00000613508		A0A1B0GUL7	405 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	PHF20L1	A8MW92	1017 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	MOGS	Q13724	837 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	C17orf99	Q6UX52	265 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	ATF7IP	Q6VMQ6	1270 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	ZFPM1	Q8IX07	1006 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	XAGE2	Q96GT9	111 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	ADGRA2	Q96PE1	1338 aa		13.79	□□□□□ -0.2
CBWD1-222	ENST00000613508	CXCL11	O14625	94 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	NPM3	O75607	178 aa	Known RBP	13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	GNAI2	P04899	355 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	RGS3	P49796	1198 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	PRMT2	P55345	433 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	TFCP2	Q12800	502 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	NBPF11	Q86T75	865 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	DZIP1	Q86YF9	867 aa	Known RBP	13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	PTCH2	Q9Y6C5	1203 aa		13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	KIAA0100	Q14667	2235 aa	Known RBP	13.78	□□□□□ -0.2
CBWD1-222	ENST00000613508	MROH7-TTC4	A0A0A0MT08	1334 aa		13.77	□□□□□ -0.21
CBWD1-222	ENST00000613508	GPR75-ASB3	A0A0A6YYF3	556 aa		13.77	□□□□□ -0.21
CBWD1-222	ENST00000613508	MAP4K4	O95819	1239 aa	Predicted RBP	13.77	□□□□□ -0.21
CBWD1-222	ENST00000613508	KIF22	Q14807	665 aa		13.77	□□□□□ -0.21
CBWD1-222	ENST00000613508	SLC9C1	Q4G0N8	1177 aa		13.77	□□□□□ -0.21
CBWD1-222	ENST00000613508	PDHX	O00330	501 aa		13.76	□□□□□ -0.21
CBWD1-222	ENST00000613508	MECOM	Q03112	1051 aa		13.76	□□□□□ -0.21
CBWD1-222	ENST00000613508	SH3BP5L	Q7L8J4	393 aa		13.76	□□□□□ -0.21
CBWD1-222	ENST00000613508	SCYL3	Q8IZE3	742 aa		13.76	□□□□□ -0.21
CBWD1-222	ENST00000613508	ZNF384	Q8TF68	577 aa		13.76	□□□□□ -0.21
CBWD1-222	ENST00000613508	ABCF2	Q9UG63	623 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms