RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 MAST3O60307 1309 aa15.56■□□□□ 0.08
CSTF1-208ENST00000613138 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
CSTF1-208ENST00000613138 DOCK2Q92608 1830 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 USP2O75604 605 aaPredicted RBP15.55■□□□□ 0.08
CSTF1-208ENST00000613138 KIF23Q02241 960 aaPredicted RBP15.55■□□□□ 0.08
CSTF1-208ENST00000613138 COL13A1Q5TAT6 717 aaPredicted RBP15.55■□□□□ 0.08
CSTF1-208ENST00000613138 ERICH6Q7L0X2 663 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 ANTXR1Q9H6X2 564 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 USP40Q9NVE5 1235 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 RAI14Q9P0K7 980 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 FAM198AQ9UFP1 575 aa15.55■□□□□ 0.08
CSTF1-208ENST00000613138 GAKO14976 1311 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 ZBTB22O15209 634 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 HMMRO75330 724 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 UQCRFS1P1P0C7P4 283 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 NF2P35240 595 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 BTDP43251 543 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 ADGRA1Q86SQ6 560 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 NSUN4Q96CB9 384 aaKnown RBP15.54■□□□□ 0.08
CSTF1-208ENST00000613138 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
CSTF1-208ENST00000613138 PPP2R3BQ9Y5P8 575 aa15.54■□□□□ 0.08
CSTF1-208ENST00000613138 MROH7-TTC4A0A0A0MT08 1334 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 FKBP1BP68106 108 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 LDLRAD1Q5T700 205 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 ARMC9Q7Z3E5 817 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 ERC1Q8IUD2 1116 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 KIF1BPQ96EK5 621 aa15.53■□□□□ 0.08
CSTF1-208ENST00000613138 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
CSTF1-208ENST00000613138 RFX7Q2KHR2 1363 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 HSPA8P11142 646 aaKnown RBP15.52■□□□□ 0.08
CSTF1-208ENST00000613138 GJA5P36382 358 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 LBX1P52954 281 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 TNFAIP1Q13829 316 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 MIGA2Q7L4E1 593 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 ZGPATQ8N5A5 531 aaKnown RBP15.52■□□□□ 0.08
CSTF1-208ENST00000613138 TMOD2Q9NZR1 351 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 LRP2BPQ9P2M1 347 aa15.52■□□□□ 0.08
CSTF1-208ENST00000613138 WDHD1O75717 1129 aaPredicted RBP15.51■□□□□ 0.07
CSTF1-208ENST00000613138 MAP2K2P36507 400 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 RGS3P49796 1198 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 RHBDL3P58872 404 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 NOGQ13253 232 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 PICALMQ13492 652 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 MAP3K11Q16584 847 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 SUPT20HL1Q3ZLR7 823 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
CSTF1-208ENST00000613138 SH3BP5LQ7L8J4 393 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 CSRNP1Q96S65 589 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
CSTF1-208ENST00000613138 FOCADQ5VW36 1801 aa15.51■□□□□ 0.07
CSTF1-208ENST00000613138 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 TNNI2P48788 182 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
CSTF1-208ENST00000613138 MAP2K1Q02750 393 aaPredicted RBP15.5■□□□□ 0.07
CSTF1-208ENST00000613138 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 TSHZ3Q63HK5 1081 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 CLASRPQ8N2M8 674 aaKnown RBP15.5■□□□□ 0.07
CSTF1-208ENST00000613138 CCDC102AQ96A19 550 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 AIDAQ96BJ3 306 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 ZNF512BQ96KM6 892 aaPredicted RBP15.5■□□□□ 0.07
CSTF1-208ENST00000613138 ELP3Q9H9T3 547 aa15.5■□□□□ 0.07
CSTF1-208ENST00000613138 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
CSTF1-208ENST00000613138 MYH7P12883 1935 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 GPR75-ASB3A0A0A6YYF3 556 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 PPP1R12BO60237 982 aaPredicted RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 CHGBP05060 677 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 IFIT2P09913 472 aaKnown RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 DYNLL1P63167 89 aaKnown RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 FAM83AQ86UY5 434 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 EXOC6Q8TAG9 804 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 FAM151AQ8WW52 585 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 FAM163AQ96GL9 167 aaPredicted RBP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 DCTPP1Q9H773 170 aa15.49■□□□□ 0.07
CSTF1-208ENST00000613138 AATFQ9NY61 560 aaKnown RBP eCLIP15.49■□□□□ 0.07
CSTF1-208ENST00000613138 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 IREB2P48200 963 aaKnown RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 FKBP1CQ5VVH2 108 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 SPRYD7Q5W111 196 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 NAA16Q6N069 864 aaPredicted RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 OTUD7AQ8TE49 926 aaPredicted RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 SLC10A4Q96EP9 437 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 WNK4Q96J92 1243 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
CSTF1-208ENST00000613138 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 BOLA2Q9H3K6 86 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 LAMB1P07942 1786 aa15.48■□□□□ 0.07
CSTF1-208ENST00000613138 MYH1P12882 1939 aa15.47■□□□□ 0.07
CSTF1-208ENST00000613138 FAM196BA6NMK8 535 aa15.47■□□□□ 0.07
CSTF1-208ENST00000613138 INPP5BP32019 993 aa15.47■□□□□ 0.07
CSTF1-208ENST00000613138 CTCFP49711 727 aaPredicted RBP15.47■□□□□ 0.07
CSTF1-208ENST00000613138 VGLL4Q14135 290 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms