RNA–Protein interactions for RNA: ENST00000612956.4

MYCBP2-212, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene MYCBP2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-212ENST00000612956 CCNL1Q9UK58 526 aaPredicted RBP8.17□□□□□ -1.1
MYCBP2-212ENST00000612956 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
MYCBP2-212ENST00000612956 MYO5AQ9Y4I1 1855 aaKnown RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 GOLGA6L22H0YM25 854 aa8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 SKOR2Q2VWA4 1001 aaPredicted RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 FAM196AQ6ZSG2 479 aa8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 DDX46Q7L014 1031 aaKnown RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 EDC3Q96F86 508 aaKnown RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 JAKMIP1Q96N16 626 aaKnown RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 MPHOSPH8Q99549 860 aa8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 RTCBQ9Y3I0 505 aaKnown RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.16□□□□□ -1.1
MYCBP2-212ENST00000612956 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 HCLS1P14317 486 aaPredicted RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 CASTP20810 708 aaKnown RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 ADORA1P30542 326 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 AK2P54819 239 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 SPRYD7Q5W111 196 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 BLOC1S2Q6QNY1 142 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 ZNF598Q86UK7 904 aaKnown RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 APPBP2Q92624 585 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 MYH13Q9UKX3 1938 aa8.15□□□□□ -1.1
MYCBP2-212ENST00000612956 RNF223E7ERA6 249 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 IGSF3O75054 1194 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 RPS6KB1P23443 525 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 UBE3CQ15386 1083 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 CHMP4CQ96CF2 233 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 CHD4Q14839 1912 aa8.14□□□□□ -1.11
MYCBP2-212ENST00000612956 GNPATO15228 680 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 BRD1O95696 1058 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 MCAMP43121 646 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 FKBP4Q02790 459 aaKnown RBP eCLIP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ADCK5Q3MIX3 580 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 CCDC102BQ68D86 513 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TMED8Q6PL24 325 aaPredicted RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TPTE2Q6XPS3 522 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ANKRD18AQ8IVF6 992 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ZGPATQ8N5A5 531 aaKnown RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 MAST3O60307 1309 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 BAG4O95429 457 aaKnown RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 HSPD1P10809 573 aaKnown RBP8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ADD2P35612 726 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ZAP70P43403 619 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 FAM182BQ5T319 152 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 NEK1Q96PY6 1258 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 SEC31BQ9NQW1 1179 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 NDUFB9Q9Y6M9 179 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 ZMYM6O95789 1325 aa8.13□□□□□ -1.11
MYCBP2-212ENST00000612956 TAF1P21675 1872 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 CCDC88AQ3V6T2 1871 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 UTRNP46939 3433 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 TRAK2O60296 914 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 GTF2E1P29083 439 aaPredicted RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 RFC4P35249 363 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 DEKP35659 375 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 CHRNDQ07001 517 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 SCARF1Q14162 830 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 PTF1AQ7RTS3 328 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 NBPF5PQ86XG9 351 aaPredicted RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 EMID1Q96A84 441 aaPredicted RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 SEC62Q99442 399 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 ANKRD2Q9GZV1 360 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 GNL3LQ9NVN8 582 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 ISY1Q9ULR0 285 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 ZNF804BA4D1E1 1349 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 PDS5AQ29RF7 1337 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 WDR33Q9C0J8 1336 aaKnown RBP8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 CARMIL3Q8ND23 1372 aa8.12□□□□□ -1.11
MYCBP2-212ENST00000612956 TCHHQ07283 1943 aa8.11□□□□□ -1.11
MYCBP2-212ENST00000612956 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
MYCBP2-212ENST00000612956 POTECB2RU33 542 aa8.11□□□□□ -1.11
MYCBP2-212ENST00000612956 M0R2C6 588 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms