RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ARHGEF6Q15052 776 aa29.5■■■□□ 2.31
MMP28-203ENST00000612672 FKBP1CQ5VVH2 108 aa29.5■■■□□ 2.31
MMP28-203ENST00000612672 C17orf99Q6UX52 265 aa29.5■■■□□ 2.31
MMP28-203ENST00000612672 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.5■■■□□ 2.31
MMP28-203ENST00000612672 CPA4Q9UI42 421 aa29.5■■■□□ 2.31
MMP28-203ENST00000612672 MOGSQ13724 837 aa29.49■■■□□ 2.31
MMP28-203ENST00000612672 MRIQ9BWK5 157 aa29.49■■■□□ 2.31
MMP28-203ENST00000612672 MRPL50Q8N5N7 158 aaKnown RBP29.48■■■□□ 2.31
MMP28-203ENST00000612672 TRIM47Q96LD4 638 aa29.48■■■□□ 2.31
MMP28-203ENST00000612672 TMOD2Q9NZR1 351 aa29.48■■■□□ 2.31
MMP28-203ENST00000612672 HHIPL2Q6UWX4 724 aa29.47■■■□□ 2.31
MMP28-203ENST00000612672 ZNF341Q9BYN7 854 aa29.47■■■□□ 2.31
MMP28-203ENST00000612672 DOCK2Q92608 1830 aa29.47■■■□□ 2.31
MMP28-203ENST00000612672 RFX5P48382 616 aaPredicted RBP29.46■■■□□ 2.31
MMP28-203ENST00000612672 PPATQ06203 517 aa29.46■■■□□ 2.31
MMP28-203ENST00000612672 NFIAQ12857 509 aa29.46■■■□□ 2.31
MMP28-203ENST00000612672 KIF16BQ96L93 1317 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 KIF22Q14807 665 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 PUM3Q15397 648 aaKnown RBP29.45■■■□□ 2.31
MMP28-203ENST00000612672 DIXDC1Q155Q3 683 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 ZNF112Q9UJU3 913 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 SUGT1Q9Y2Z0 365 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 DAGLAQ9Y4D2 1042 aa29.45■■■□□ 2.31
MMP28-203ENST00000612672 LAMA3Q16787 3333 aa29.45■■■□□ 2.3
MMP28-203ENST00000612672 MAST3O60307 1309 aa29.45■■■□□ 2.3
MMP28-203ENST00000612672 ZNF521Q96K83 1311 aa29.45■■■□□ 2.3
MMP28-203ENST00000612672 PTPRFP10586 1907 aa29.44■■■□□ 2.3
MMP28-203ENST00000612672 DCAF15Q66K64 600 aa29.44■■■□□ 2.3
MMP28-203ENST00000612672 USP44Q9H0E7 712 aa29.44■■■□□ 2.3
MMP28-203ENST00000612672 SRRDQ9UH36 339 aa29.44■■■□□ 2.3
MMP28-203ENST00000612672 KCNH4Q9UQ05 1017 aa29.44■■■□□ 2.3
MMP28-203ENST00000612672 PDHXO00330 501 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 OSBPP22059 807 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 PSMC4P43686 418 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 TCP10Q12799 353 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 CDC42EP5Q6NZY7 148 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 ANKRD23Q86SG2 305 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 FAM151AQ8WW52 585 aa29.43■■■□□ 2.3
MMP28-203ENST00000612672 FAM198AQ9UFP1 575 aa29.42■■■□□ 2.3
MMP28-203ENST00000612672 ATRNL1Q5VV63 1379 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 PHIPQ8WWQ0 1821 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 WDHD1O75717 1129 aaPredicted RBP29.41■■■□□ 2.3
MMP28-203ENST00000612672 GNRH1P01148 92 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 PRDX5P30044 214 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 ZFPM1Q8IX07 1006 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 HOOK2Q96ED9 719 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 MYH2Q9UKX2 1941 aa29.41■■■□□ 2.3
MMP28-203ENST00000612672 IFIT1P09914 478 aaKnown RBP29.4■■■□□ 2.3
MMP28-203ENST00000612672 PRMT2P55345 433 aa29.4■■■□□ 2.3
MMP28-203ENST00000612672 ATG9AQ7Z3C6 839 aa29.4■■■□□ 2.3
MMP28-203ENST00000612672 EYA2O00167 538 aa29.39■■■□□ 2.3
MMP28-203ENST00000612672 GPAT2Q6NUI2 795 aa29.39■■■□□ 2.3
MMP28-203ENST00000612672 CHRDL2Q6WN34 429 aa29.39■■■□□ 2.3
MMP28-203ENST00000612672 UBE2Q1Q7Z7E8 422 aa29.39■■■□□ 2.3
MMP28-203ENST00000612672 FAM9BQ8IZU0 186 aa29.39■■■□□ 2.3
MMP28-203ENST00000612672 SLURP2P0DP57 97 aa29.38■■■□□ 2.29
MMP28-203ENST00000612672 NOL9Q5SY16 702 aaKnown RBP29.38■■■□□ 2.29
MMP28-203ENST00000612672 MYPNQ86TC9 1320 aa29.38■■■□□ 2.29
MMP28-203ENST00000612672 CYP2C8P10632 490 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 BCRP11274 1271 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 GRK4P32298 578 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 WDR66Q8TBY9 1149 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 SSH1Q8WYL5 1049 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 LPIN2Q92539 896 aa29.37■■■□□ 2.29
MMP28-203ENST00000612672 SLC5A1P13866 664 aa29.36■■■□□ 2.29
MMP28-203ENST00000612672 PRKCZQ05513 592 aa29.36■■■□□ 2.29
MMP28-203ENST00000612672 PTPRCP08575 1304 aa29.36■■■□□ 2.29
MMP28-203ENST00000612672 DOCK1Q14185 1865 aa29.36■■■□□ 2.29
MMP28-203ENST00000612672 ANP32CO43423 234 aa29.35■■■□□ 2.29
MMP28-203ENST00000612672 FMNL1O95466 1100 aaPredicted RBP29.35■■■□□ 2.29
MMP28-203ENST00000612672 CCL5P13501 91 aa29.35■■■□□ 2.29
MMP28-203ENST00000612672 RBM27Q9P2N5 1060 aaKnown RBP29.35■■■□□ 2.29
MMP28-203ENST00000612672 GABRQQ9UN88 632 aa29.35■■■□□ 2.29
MMP28-203ENST00000612672 RFX7Q2KHR2 1363 aa29.35■■■□□ 2.29
MMP28-203ENST00000612672 COL6A3P12111 3177 aa29.35■■■□□ 2.29
MMP28-203ENST00000612672 RAET1EQ8TD07 263 aa29.34■■■□□ 2.29
MMP28-203ENST00000612672 ALPK3Q96L96 1907 aa29.33■■■□□ 2.29
MMP28-203ENST00000612672 DOCK3Q8IZD9 2030 aa29.33■■■□□ 2.29
MMP28-203ENST00000612672 PHF20L1A8MW92 1017 aa29.33■■■□□ 2.29
MMP28-203ENST00000612672 GJA8P48165 433 aa29.33■■■□□ 2.29
MMP28-203ENST00000612672 USP40Q9NVE5 1235 aa29.33■■■□□ 2.29
MMP28-203ENST00000612672 SH3BP5LQ7L8J4 393 aa29.32■■■□□ 2.28
MMP28-203ENST00000612672 SIL1Q9H173 461 aa29.32■■■□□ 2.28
MMP28-203ENST00000612672 GJB1P08034 283 aa29.31■■■□□ 2.28
MMP28-203ENST00000612672 PHKA1P46020 1223 aa29.31■■■□□ 2.28
MMP28-203ENST00000612672 DPF3Q92784 378 aa29.31■■■□□ 2.28
MMP28-203ENST00000612672 PRO3102Q9H379 93 aa29.31■■■□□ 2.28
MMP28-203ENST00000612672 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.31■■■□□ 2.28
MMP28-203ENST00000612672 PARK7Q99497 189 aaKnown RBP29.3■■■□□ 2.28
MMP28-203ENST00000612672 LDHBP07195 334 aaKnown RBP29.29■■■□□ 2.28
MMP28-203ENST00000612672 ZEB1P37275 1124 aaPredicted RBP29.29■■■□□ 2.28
MMP28-203ENST00000612672 RGS3P49796 1198 aa29.29■■■□□ 2.28
MMP28-203ENST00000612672 ATP2B3Q16720 1220 aa29.29■■■□□ 2.28
MMP28-203ENST00000612672 RNF208Q9H0X6 261 aa29.29■■■□□ 2.28
MMP28-203ENST00000612672 UNC93B1Q9H1C4 597 aa29.29■■■□□ 2.28
MMP28-203ENST00000612672 SALL1Q9NSC2 1324 aa29.28■■■□□ 2.28
MMP28-203ENST00000612672 A0A0G2JLL6 359 aaPredicted RBP29.28■■■□□ 2.28
MMP28-203ENST00000612672 HOXD10P28358 340 aa29.28■■■□□ 2.28
MMP28-203ENST00000612672 ADORA1P30542 326 aa29.28■■■□□ 2.28
MMP28-203ENST00000612672 PRRT2Q7Z6L0 340 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms