RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 IL6STP40189 918 aaPredicted RBP15.05■□□□□ 0
TCF3-220ENST00000611869 AKNAD1Q5T1N1 836 aa15.05■□□□□ 0
TCF3-220ENST00000611869 C17orf53Q8N3J3 647 aaPredicted RBP15.05■□□□□ 0
TCF3-220ENST00000611869 ZC3H12CQ9C0D7 883 aaKnown RBP15.05■□□□□ 0
TCF3-220ENST00000611869 IFNKQ9P0W0 207 aa15.05■□□□□ 0
TCF3-220ENST00000611869 KCNJ14Q9UNX9 436 aa15.05■□□□□ 0
TCF3-220ENST00000611869 DIP2AQ14689 1571 aa15.05■□□□□ 0
TCF3-220ENST00000611869 NR1I2O75469 434 aa15.05■□□□□ -0
TCF3-220ENST00000611869 KRT2P35908 639 aa15.05■□□□□ -0
TCF3-220ENST00000611869 RPS8P62241 208 aaKnown RBP15.05■□□□□ -0
TCF3-220ENST00000611869 HLFQ16534 295 aa15.05■□□□□ -0
TCF3-220ENST00000611869 TMEM266Q2M3C6 531 aa15.05■□□□□ -0
TCF3-220ENST00000611869 HSP90B2PQ58FF3 399 aa15.05■□□□□ -0
TCF3-220ENST00000611869 SDR42E1Q8WUS8 393 aa15.05■□□□□ -0
TCF3-220ENST00000611869 RAB34Q9BZG1 259 aa15.05■□□□□ -0
TCF3-220ENST00000611869 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ -0
TCF3-220ENST00000611869 M0R2C6 588 aa15.05■□□□□ -0
TCF3-220ENST00000611869 BMP15O95972 392 aa15.05■□□□□ -0
TCF3-220ENST00000611869 PDIA3P30101 505 aaKnown RBP15.05■□□□□ -0
TCF3-220ENST00000611869 STX17P56962 302 aa15.05■□□□□ -0
TCF3-220ENST00000611869 IFNL3Q8IZI9 196 aa15.05■□□□□ -0
TCF3-220ENST00000611869 CMTR1Q8N1G2 835 aaKnown RBP15.05■□□□□ -0
TCF3-220ENST00000611869 NUP88Q99567 741 aaPredicted RBP15.05■□□□□ -0
TCF3-220ENST00000611869 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
TCF3-220ENST00000611869 C1orf167Q5SNV9 1468 aa15.04■□□□□ -0
TCF3-220ENST00000611869 HLA-DOAP06340 250 aa15.04■□□□□ -0
TCF3-220ENST00000611869 MCM7P33993 719 aa15.04■□□□□ -0
TCF3-220ENST00000611869 GNAQP50148 359 aa15.04■□□□□ -0
TCF3-220ENST00000611869 NBPF26B4DH59 902 aa15.04■□□□□ -0
TCF3-220ENST00000611869 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
TCF3-220ENST00000611869 NBPF14Q5TI25 921 aa15.04■□□□□ -0
TCF3-220ENST00000611869 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
TCF3-220ENST00000611869 NBPF15Q8N660 670 aa15.04■□□□□ -0
TCF3-220ENST00000611869 DEXIO95424 95 aa15.04■□□□□ -0
TCF3-220ENST00000611869 NAPAP54920 295 aa15.04■□□□□ -0
TCF3-220ENST00000611869 RRAGBQ5VZM2 374 aa15.04■□□□□ -0
TCF3-220ENST00000611869 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
TCF3-220ENST00000611869 ZNF174Q15697 407 aa15.03■□□□□ -0
TCF3-220ENST00000611869 N4BP3O15049 544 aa15.03■□□□□ -0
TCF3-220ENST00000611869 UFL1O94874 794 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CHRNDQ07001 517 aa15.03■□□□□ -0
TCF3-220ENST00000611869 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
TCF3-220ENST00000611869 KIAA1328Q86T90 577 aa15.03■□□□□ -0
TCF3-220ENST00000611869 PUS7LQ9H0K6 701 aaKnown RBP15.03■□□□□ -0
TCF3-220ENST00000611869 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
TCF3-220ENST00000611869 FAM182BQ5T319 152 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CCDC150Q8NCX0 1101 aa15.03■□□□□ -0
TCF3-220ENST00000611869 STAT6P42226 847 aa15.03■□□□□ -0
TCF3-220ENST00000611869 RILPL1Q5EBL4 403 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CEP135Q66GS9 1140 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CALML4Q96GE6 196 aa15.03■□□□□ -0
TCF3-220ENST00000611869 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
TCF3-220ENST00000611869 MYOM1P52179 1685 aa15.02■□□□□ -0
TCF3-220ENST00000611869 SNAP23O00161 211 aa15.02■□□□□ -0
TCF3-220ENST00000611869 ZNF202O95125 648 aa15.02■□□□□ -0
TCF3-220ENST00000611869 ELP1O95163 1332 aa15.02■□□□□ -0
TCF3-220ENST00000611869 VWA3AA6NCI4 1184 aa15.02■□□□□ -0
TCF3-220ENST00000611869 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
TCF3-220ENST00000611869 KCNH3Q9ULD8 1083 aa15.02□□□□□ -0.01
TCF3-220ENST00000611869 WWC3Q9ULE0 1092 aa15.02□□□□□ -0.01
TCF3-220ENST00000611869 USP17L12C9JPN9 530 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 USP17L21D6R901 530 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 MTIF2P46199 727 aaKnown RBP15.01□□□□□ -0.01
TCF3-220ENST00000611869 PRIMPOLQ96LW4 560 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 UBA5Q9GZZ9 404 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 CALML3P27482 149 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 KIF4BQ2VIQ3 1234 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 TEX11Q8IYF3 940 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 PLIN2Q99541 437 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 USP21Q9UK80 565 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 UBE3CQ15386 1083 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 NSUN7Q8NE18 718 aaKnown RBP15.01□□□□□ -0.01
TCF3-220ENST00000611869 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
TCF3-220ENST00000611869 PPARAQ07869 468 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 FTOQ9C0B1 505 aaKnown RBP eCLIP15.01□□□□□ -0.01
TCF3-220ENST00000611869 ZDHHC9Q9Y397 364 aa15.01□□□□□ -0.01
TCF3-220ENST00000611869 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
TCF3-220ENST00000611869 CCDC178Q5BJE1 867 aa15□□□□□ -0.01
TCF3-220ENST00000611869 FAM47AQ5JRC9 791 aa15□□□□□ -0.01
TCF3-220ENST00000611869 FKBP15Q5T1M5 1219 aa15□□□□□ -0.01
TCF3-220ENST00000611869 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
TCF3-220ENST00000611869 RUFY1Q96T51 708 aa15□□□□□ -0.01
TCF3-220ENST00000611869 KIF5CO60282 957 aa15□□□□□ -0.01
TCF3-220ENST00000611869 CT47A1Q5JQC4 288 aaPredicted RBP15□□□□□ -0.01
TCF3-220ENST00000611869 IL25Q9H293 177 aa15□□□□□ -0.01
TCF3-220ENST00000611869 USP32Q8NFA0 1604 aa15□□□□□ -0.01
TCF3-220ENST00000611869 PYM1Q9BRP8 204 aaKnown RBP15□□□□□ -0.01
TCF3-220ENST00000611869 ACBD3Q9H3P7 528 aa15□□□□□ -0.01
TCF3-220ENST00000611869 VPS54Q9P1Q0 977 aa15□□□□□ -0.01
TCF3-220ENST00000611869 POLR2DO15514 142 aaKnown RBP14.99□□□□□ -0.01
TCF3-220ENST00000611869 GNG11P61952 73 aa14.99□□□□□ -0.01
TCF3-220ENST00000611869 ZNF654Q8IZM8 581 aa14.99□□□□□ -0.01
TCF3-220ENST00000611869 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
TCF3-220ENST00000611869 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
TCF3-220ENST00000611869 PPP1R9BQ96SB3 815 aa14.99□□□□□ -0.01
TCF3-220ENST00000611869 TRMT1LQ7Z2T5 733 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms