RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 MYCP01106 439 aaPredicted RBP13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 INPP5BP32019 993 aa13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 LACTBP83111 547 aaPredicted RBP13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PPIL2Q13356 520 aa13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 MAST3O60307 1309 aa13.49□□□□□ -0.25
PRAMEF28P-201ENST00000610289 CCER2I3L3R5 266 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 EYA2O00167 538 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PPATQ06203 517 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ATG9AQ7Z3C6 839 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 WDR66Q8TBY9 1149 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ZNF341Q9BYN7 854 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 CTGFP29279 349 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 NFIAQ12857 509 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 KIF22Q14807 665 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 DIXDC1Q155Q3 683 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 LPIN2Q92539 896 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ZNF112Q9UJU3 913 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
PRAMEF28P-201ENST00000610289 RPAP1Q9BWH6 1393 aaPredicted RBP13.47□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SLC5A1P13866 664 aa13.47□□□□□ -0.25
PRAMEF28P-201ENST00000610289 TCP10Q12799 353 aa13.47□□□□□ -0.25
PRAMEF28P-201ENST00000610289 CPA4Q9UI42 421 aa13.47□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PDHXO00330 501 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 GNRH1P01148 92 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PRDX5P30044 214 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 MOGSQ13724 837 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ANKRD23Q86SG2 305 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 KCNH4Q9UQ05 1017 aa13.46□□□□□ -0.25
PRAMEF28P-201ENST00000610289 RANBP2P49792 3224 aaKnown RBP13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 TRIOBPQ9H2D6 2365 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 E9PSI1 815 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PSMC4P43686 418 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 MIER1Q8N108 512 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SIL1Q9H173 461 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ZSWIM8A7E2V4 1837 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PRMT2P55345 433 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SRRDQ9UH36 339 aa13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
PRAMEF28P-201ENST00000610289 H0YGN5 161 aa13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CIAO1O76071 339 aa13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 OSBPP22059 807 aa13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 MTFR1Q15390 333 aa13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 NOL9Q5SY16 702 aaKnown RBP13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PHKA1P46020 1223 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SZT2Q5T011 3432 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SALL1Q9NSC2 1324 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CXCL11O14625 94 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CYP2C8P10632 490 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SEMA3EO15041 775 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 BCRP11274 1271 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 HOXD10P28358 340 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ADORA1P30542 326 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 GRK4P32298 578 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 RGS3P49796 1198 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SH3BP5LQ7L8J4 393 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PA2G4Q9UQ80 394 aaKnown RBP13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ZHX2Q9Y6X8 837 aa13.41□□□□□ -0.26
PRAMEF28P-201ENST00000610289 ATRNL1Q5VV63 1379 aa13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
PRAMEF28P-201ENST00000610289 GAKO14976 1311 aa13.39□□□□□ -0.27
PRAMEF28P-201ENST00000610289 MYPNQ86TC9 1320 aa13.39□□□□□ -0.27
PRAMEF28P-201ENST00000610289 ZBTB22O15209 634 aa13.39□□□□□ -0.27
PRAMEF28P-201ENST00000610289 ENTPD3O75355 529 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms