RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 DCAF15Q66K64 600 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 DAGLAQ9Y4D2 1042 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 IRF6O14896 467 aa16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 LDHBP07195 334 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 PHKA1P46020 1223 aa16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 PRPF38BQ5VTL8 546 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
POLR2J3-219ENST00000608621 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 INPP5BP32019 993 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 PPIL2Q13356 520 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 MEIS3Q99687 375 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 USP40Q9NVE5 1235 aa16.65■□□□□ 0.26
POLR2J3-219ENST00000608621 ADORA1P30542 326 aa16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 TIMM10P62072 90 aa16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 PPATQ06203 517 aa16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 NFIAQ12857 509 aa16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-219ENST00000608621 SEMA3EO15041 775 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 TLR2O60603 784 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
POLR2J3-219ENST00000608621 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
POLR2J3-219ENST00000608621 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
POLR2J3-219ENST00000608621 ZCCHC17Q9NP64 241 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-219ENST00000608621 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-219ENST00000608621 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
POLR2J3-219ENST00000608621 GNAI3P08754 354 aa16.61■□□□□ 0.25
POLR2J3-219ENST00000608621 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
POLR2J3-219ENST00000608621 KIF22Q14807 665 aa16.61■□□□□ 0.25
POLR2J3-219ENST00000608621 PTCH2Q9Y6C5 1203 aa16.61■□□□□ 0.25
POLR2J3-219ENST00000608621 ZBTB22O15209 634 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 SRGAP3O43295 1099 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 TFCP2Q12800 502 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 ABCF2Q9UG63 623 aa16.6■□□□□ 0.25
POLR2J3-219ENST00000608621 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 RGS3P49796 1198 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 RASGRF1Q13972 1273 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 C17orf99Q6UX52 265 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 ANKRD23Q86SG2 305 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 IDI2Q9BXS1 227 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 KCNH4Q9UQ05 1017 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
POLR2J3-219ENST00000608621 HTTP42858 3142 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 PDHXO00330 501 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 ENTPD3O75355 529 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 MTX1Q13505 466 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 NEUROD6Q96NK8 337 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 CPA4Q9UI42 421 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 MYH2Q9UKX2 1941 aa16.58■□□□□ 0.24
POLR2J3-219ENST00000608621 GAKO14976 1311 aa16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 MOGSQ13724 837 aa16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 SH3BP5LQ7L8J4 393 aa16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
POLR2J3-219ENST00000608621 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 PHF20L1A8MW92 1017 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 CXCL11O14625 94 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 BCAR3O75815 825 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 MYCP01106 439 aaPredicted RBP16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 GNRH1P01148 92 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
POLR2J3-219ENST00000608621 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 GNAI2P04899 355 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms