RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 MROH5Q6ZUA9 1318 aa16.96■□□□□ 0.3
CTSA-218ENST00000607814 EYA2O00167 538 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 PDE8BO95263 885 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 ATG9AQ7Z3C6 839 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
CTSA-218ENST00000607814 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 ARAP2Q8WZ64 1704 aa16.95■□□□□ 0.3
CTSA-218ENST00000607814 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
CTSA-218ENST00000607814 BCAMP50895 628 aa16.94■□□□□ 0.3
CTSA-218ENST00000607814 SNAPC2Q13487 334 aa16.94■□□□□ 0.3
CTSA-218ENST00000607814 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
CTSA-218ENST00000607814 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
CTSA-218ENST00000607814 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
CTSA-218ENST00000607814 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 GNAI3P08754 354 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 CRKP46108 304 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 HDLBPQ00341 1268 aaKnown RBP16.93■□□□□ 0.3
CTSA-218ENST00000607814 CHAF1AQ13111 956 aaPredicted RBP16.93■□□□□ 0.3
CTSA-218ENST00000607814 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
CTSA-218ENST00000607814 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 COL6A3P12111 3177 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 LAMA3Q16787 3333 aa16.93■□□□□ 0.3
CTSA-218ENST00000607814 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 BTBD19C9JJ37 291 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
CTSA-218ENST00000607814 HOXD10P28358 340 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 PPIL2Q13356 520 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 GRIK5Q16478 980 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 DPF3Q92784 378 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 ARHGAP39Q9C0H5 1083 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
CTSA-218ENST00000607814 SNCAIPQ9Y6H5 919 aa16.92■□□□□ 0.3
CTSA-218ENST00000607814 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 GNAI2P04899 355 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 FKBP1CQ5VVH2 108 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 C17orf99Q6UX52 265 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 FAM83AQ86UY5 434 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 SHISA4Q96DD7 197 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
CTSA-218ENST00000607814 SRRDQ9UH36 339 aa16.91■□□□□ 0.3
CTSA-218ENST00000607814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.91■□□□□ 0.3
CTSA-218ENST00000607814 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 IRF6O14896 467 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 GJB1P08034 283 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 CAPN2P17655 700 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 FGFR2P21802 821 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 GJA8P48165 433 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 PUM3Q15397 648 aaKnown RBP16.9■□□□□ 0.3
CTSA-218ENST00000607814 UBE2Q1Q7Z7E8 422 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 NR2E3Q9Y5X4 410 aa16.9■□□□□ 0.3
CTSA-218ENST00000607814 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CTSA-218ENST00000607814 GRK4P32298 578 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 PPATQ06203 517 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 MTFR1Q15390 333 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
CTSA-218ENST00000607814 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
CTSA-218ENST00000607814 ADORA1P30542 326 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 PSMC4P43686 418 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 TIMM10P62072 90 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 COPRSQ9NQ92 184 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
CTSA-218ENST00000607814 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
CTSA-218ENST00000607814 ZSWIM8A7E2V4 1837 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
CTSA-218ENST00000607814 CIAO1O76071 339 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 SLC5A1P13866 664 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 IL15P40933 162 aaPredicted RBP16.87■□□□□ 0.29
CTSA-218ENST00000607814 TFCP2Q12800 502 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
CTSA-218ENST00000607814 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 RCAN3Q9UKA8 241 aa16.87■□□□□ 0.29
CTSA-218ENST00000607814 OSBPP22059 807 aa16.86■□□□□ 0.29
CTSA-218ENST00000607814 UBXN2AP68543 259 aa16.86■□□□□ 0.29
CTSA-218ENST00000607814 SLC17A8Q8NDX2 589 aa16.86■□□□□ 0.29
CTSA-218ENST00000607814 LPIN2Q92539 896 aa16.86■□□□□ 0.29
CTSA-218ENST00000607814 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
CTSA-218ENST00000607814 DLL1O00548 723 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 FMNL1O95466 1100 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms