RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SUCLG2Q96I99 432 aa18.91■□□□□ 0.62
SSBP4-214ENST00000607020 CPA4Q9UI42 421 aa18.91■□□□□ 0.62
SSBP4-214ENST00000607020 RANBP2P49792 3224 aaKnown RBP18.91■□□□□ 0.62
SSBP4-214ENST00000607020 MAST3O60307 1309 aa18.91■□□□□ 0.62
SSBP4-214ENST00000607020 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-214ENST00000607020 PDHXO00330 501 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 CHAF1AQ13111 956 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-214ENST00000607020 MOGSQ13724 837 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 RABL6Q3YEC7 729 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-214ENST00000607020 VGLL2Q8N8G2 317 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-214ENST00000607020 RAET1EQ8TD07 263 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 UTYO14607 1347 aa18.9■□□□□ 0.62
SSBP4-214ENST00000607020 FRAT2O75474 233 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-214ENST00000607020 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-214ENST00000607020 CCL5P13501 91 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 INPP5BP32019 993 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 FAM151AQ8WW52 585 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 IQSEC3Q9UPP2 1182 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-214ENST00000607020 NR2E3Q9Y5X4 410 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 OTOFQ9HC10 1997 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
SSBP4-214ENST00000607020 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 PDE8BO95263 885 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 UBXN2AP68543 259 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
SSBP4-214ENST00000607020 MIGA2Q7L4E1 593 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 RNF208Q9H0X6 261 aa18.88■□□□□ 0.61
SSBP4-214ENST00000607020 A0A1W2PPC1 479 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 CXCL11O14625 94 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 BCRP11274 1271 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 BCAMP50895 628 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 LRRC24Q50LG9 513 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 METTL24Q5JXM2 366 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 MYPNQ86TC9 1320 aa18.87■□□□□ 0.61
SSBP4-214ENST00000607020 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-214ENST00000607020 NBPF7P0C2Y1 421 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-214ENST00000607020 SLAIN1Q8ND83 568 aa18.86■□□□□ 0.61
SSBP4-214ENST00000607020 PARK7Q99497 189 aaKnown RBP18.86■□□□□ 0.61
SSBP4-214ENST00000607020 FGFR2P21802 821 aa18.85■□□□□ 0.61
SSBP4-214ENST00000607020 FCGRTP55899 365 aa18.85■□□□□ 0.61
SSBP4-214ENST00000607020 GPAT2Q6NUI2 795 aa18.85■□□□□ 0.61
SSBP4-214ENST00000607020 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
SSBP4-214ENST00000607020 U2AF1L4Q8WU68 220 aaKnown RBP18.85■□□□□ 0.61
SSBP4-214ENST00000607020 A0A1B0GUL6 1792 aa18.85■□□□□ 0.61
SSBP4-214ENST00000607020 ARAP2Q8WZ64 1704 aa18.84■□□□□ 0.61
SSBP4-214ENST00000607020 SGPL1O95470 568 aa18.84■□□□□ 0.61
SSBP4-214ENST00000607020 PRKCZQ05513 592 aa18.84■□□□□ 0.61
SSBP4-214ENST00000607020 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
SSBP4-214ENST00000607020 WDR66Q8TBY9 1149 aa18.84■□□□□ 0.61
SSBP4-214ENST00000607020 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
SSBP4-214ENST00000607020 BIN2Q9UBW5 565 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-214ENST00000607020 FARP2O94887 1054 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-214ENST00000607020 IFIT1P09914 478 aaKnown RBP18.83■□□□□ 0.6
SSBP4-214ENST00000607020 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
SSBP4-214ENST00000607020 PXYLP1Q8TE99 480 aa18.83■□□□□ 0.6
SSBP4-214ENST00000607020 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-214ENST00000607020 IRF5Q13568 498 aa18.82■□□□□ 0.6
SSBP4-214ENST00000607020 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
SSBP4-214ENST00000607020 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
SSBP4-214ENST00000607020 SLC17A8Q8NDX2 589 aa18.82■□□□□ 0.6
SSBP4-214ENST00000607020 UNC93B1Q9H1C4 597 aa18.82■□□□□ 0.6
SSBP4-214ENST00000607020 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-214ENST00000607020 SLC45A1Q9Y2W3 748 aa18.82■□□□□ 0.6
SSBP4-214ENST00000607020 DLL1O00548 723 aa18.81■□□□□ 0.6
SSBP4-214ENST00000607020 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
SSBP4-214ENST00000607020 GABRQQ9UN88 632 aa18.81■□□□□ 0.6
SSBP4-214ENST00000607020 DAGLAQ9Y4D2 1042 aa18.81■□□□□ 0.6
SSBP4-214ENST00000607020 PHF20L1A8MW92 1017 aa18.8■□□□□ 0.6
SSBP4-214ENST00000607020 CYP2C8P10632 490 aa18.8■□□□□ 0.6
SSBP4-214ENST00000607020 MAP3K10Q02779 954 aa18.8■□□□□ 0.6
SSBP4-214ENST00000607020 NFIAQ12857 509 aa18.8■□□□□ 0.6
SSBP4-214ENST00000607020 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 A0A0G2JLL6 359 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-214ENST00000607020 ZBTB22O15209 634 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 ADCY3O60266 1144 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 TCP10Q12799 353 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 PRRT2Q7Z6L0 340 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-214ENST00000607020 LPIN2Q92539 896 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 CRISPLD2Q9H0B8 497 aa18.79■□□□□ 0.6
SSBP4-214ENST00000607020 EVI5O60447 810 aa18.78■□□□□ 0.6
SSBP4-214ENST00000607020 FLT3LGP49771 235 aa18.78■□□□□ 0.6
SSBP4-214ENST00000607020 SCYL3Q8IZE3 742 aa18.78■□□□□ 0.6
SSBP4-214ENST00000607020 PAK6Q9NQU5 681 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-214ENST00000607020 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
SSBP4-214ENST00000607020 ZHX2Q9Y6X8 837 aa18.78■□□□□ 0.6
SSBP4-214ENST00000607020 SLC5A1P13866 664 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 PTPRAP18433 802 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 DIXDC1Q155Q3 683 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 ATRNL1Q5VV63 1379 aa18.77■□□□□ 0.6
SSBP4-214ENST00000607020 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.59
SSBP4-214ENST00000607020 SALL1Q9NSC2 1324 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 EYA2O00167 538 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 SOX1O00570 391 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-214ENST00000607020 ENTPD3O75355 529 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms