RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 CDC42EP5Q6NZY7 148 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 ZGPATQ8N5A5 531 aaKnown RBP16.52■□□□□ 0.24
CTSA-213ENST00000606782 FAM151AQ8WW52 585 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 OPTNQ96CV9 577 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.51■□□□□ 0.23
CTSA-213ENST00000606782 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
CTSA-213ENST00000606782 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 CSADQ9Y600 493 aa16.51■□□□□ 0.23
CTSA-213ENST00000606782 GAKO14976 1311 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 PNMA6EA0A0J9YXQ4 647 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 MS4A1P11836 297 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 MLLT1Q03111 559 aaPredicted RBP16.5■□□□□ 0.23
CTSA-213ENST00000606782 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
CTSA-213ENST00000606782 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
CTSA-213ENST00000606782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
CTSA-213ENST00000606782 GTF2A2P52657 109 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 POLA2Q14181 598 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 FBXO46Q6PJ61 603 aaPredicted RBP16.49■□□□□ 0.23
CTSA-213ENST00000606782 ERO1BQ86YB8 467 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 BRI3BPQ8WY22 251 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 FAM198AQ9UFP1 575 aa16.49■□□□□ 0.23
CTSA-213ENST00000606782 SUPT16HQ9Y5B9 1047 aaKnown RBP16.49■□□□□ 0.23
CTSA-213ENST00000606782 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
CTSA-213ENST00000606782 RLBP1P12271 317 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
CTSA-213ENST00000606782 NFIAQ12857 509 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 CRHR2Q13324 411 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 SPTY2D1Q68D10 685 aaPredicted RBP16.48■□□□□ 0.23
CTSA-213ENST00000606782 SSH3Q8TE77 659 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
CTSA-213ENST00000606782 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
CTSA-213ENST00000606782 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTSA-213ENST00000606782 PPIL2Q13356 520 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 SLF2Q8IX21 1173 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 RFX7Q2KHR2 1363 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 MYH2Q9UKX2 1941 aa16.47■□□□□ 0.23
CTSA-213ENST00000606782 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
CTSA-213ENST00000606782 ENTPD3O75355 529 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
CTSA-213ENST00000606782 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 PPATQ06203 517 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 CCL15Q16663 113 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
CTSA-213ENST00000606782 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
CTSA-213ENST00000606782 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
CTSA-213ENST00000606782 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 IRF6O14896 467 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 CETPP11597 493 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 TCP10Q12799 353 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
CTSA-213ENST00000606782 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
CTSA-213ENST00000606782 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
CTSA-213ENST00000606782 ATRNL1Q5VV63 1379 aa16.45■□□□□ 0.22
CTSA-213ENST00000606782 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
CTSA-213ENST00000606782 MAP4K4O95819 1239 aaPredicted RBP16.44■□□□□ 0.22
CTSA-213ENST00000606782 INPP5BP32019 993 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 DZIP1Q86YF9 867 aaKnown RBP16.44■□□□□ 0.22
CTSA-213ENST00000606782 ZFPM1Q8IX07 1006 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
CTSA-213ENST00000606782 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
CTSA-213ENST00000606782 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 RGS3P49796 1198 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 SP3Q02447 781 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 MECOMQ03112 1051 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 KCNH4Q9UQ05 1017 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
CTSA-213ENST00000606782 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 MCAMP43121 646 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms