RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 WBP1LQ9NX94 342 aa15.69■□□□□ 0.1
SHROOM1-207ENST00000606676 THSD7BQ9C0I4 1608 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 ZAP70P43403 619 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 TNNI2P48788 182 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 MAP3K11Q16584 847 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 FAM83AQ86UY5 434 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 CLASRPQ8N2M8 674 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 CCDC102AQ96A19 550 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 DCTPP1Q9H773 170 aa15.68■□□□□ 0.1
SHROOM1-207ENST00000606676 SLC10A3P09131 477 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 NFIAQ12857 509 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 NOGQ13253 232 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 USP40Q9NVE5 1235 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 MROH7-TTC4A0A0A0MT08 1334 aa15.67■□□□□ 0.1
SHROOM1-207ENST00000606676 GPR75-ASB3A0A0A6YYF3 556 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 USP2O75604 605 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 MAP2K1Q02750 393 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 SLF2Q8IX21 1173 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 PIH1D3Q9NQM4 214 aaKnown RBP15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 LRP2BPQ9P2M1 347 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 FAM198AQ9UFP1 575 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 NDUFB9Q9Y6M9 179 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
SHROOM1-207ENST00000606676 FOXN1O15353 648 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 BTDP43251 543 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 RHBDL3P58872 404 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 ZFPM1Q8IX07 1006 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 IDI2Q9BXS1 227 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 LRRCC1Q9C099 1032 aa15.65■□□□□ 0.1
SHROOM1-207ENST00000606676 RFX7Q2KHR2 1363 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 WDHD1O75717 1129 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 IFIT2P09913 472 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 GSTO1P78417 241 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 KIF23Q02241 960 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 TCP10Q12799 353 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 FAM151AQ8WW52 585 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 CLMNQ96JQ2 1002 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 ANTXR1Q9H6X2 564 aa15.64■□□□□ 0.09
SHROOM1-207ENST00000606676 RPAP1Q9BWH6 1393 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-207ENST00000606676 LDHCP07864 332 aa15.63■□□□□ 0.09
SHROOM1-207ENST00000606676 IREB2P48200 963 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-207ENST00000606676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHROOM1-207ENST00000606676 UNCXA6NJT0 531 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 IGSF3O75054 1194 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 RGS3P49796 1198 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 NAA16Q6N069 864 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 ADGRA1Q86SQ6 560 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 CSRNP1Q96S65 589 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 DDX4Q9NQI0 724 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 MYH2Q9UKX2 1941 aa15.62■□□□□ 0.09
SHROOM1-207ENST00000606676 ENTPD3O75355 529 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 ATP5JP18859 108 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 SH3BP5LQ7L8J4 393 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 ANKRD13AQ8IZ07 590 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 AIDAQ96BJ3 306 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 SLC10A4Q96EP9 437 aa15.61■□□□□ 0.09
SHROOM1-207ENST00000606676 IDH1O75874 414 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 MAP4K4O95819 1239 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 PPP4CP60510 307 aa15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 MKRN3Q13064 507 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 SPRYD7Q5W111 196 aa15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 ATRNL1Q5VV63 1379 aa15.6■□□□□ 0.09
SHROOM1-207ENST00000606676 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 HSPA8P11142 646 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 GJA5P36382 358 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 MAP3K9P80192 1104 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 AAMPQ13685 434 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 SH3RF3Q8TEJ3 882 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 HOOK2Q96ED9 719 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 EDC3Q96F86 508 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 WNK4Q96J92 1243 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 DNAJC2Q99543 621 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 BEGAINQ9BUH8 593 aa15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 AATFQ9NY61 560 aaKnown RBP eCLIP15.59■□□□□ 0.09
SHROOM1-207ENST00000606676 GOLIM4O00461 696 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 CYP7A1P22680 504 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 PICALMQ13492 652 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 VGLL4Q14135 290 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 TTF1Q15361 905 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 COL13A1Q5TAT6 717 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 MAGEB6Q8N7X4 407 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 BOLA2Q9H3K6 86 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
SHROOM1-207ENST00000606676 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms