RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 BMP1P13497 986 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 IQCB1Q15051 598 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 CCDC158Q5M9N0 1113 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 TEX2Q8IWB9 1127 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 SMARCE1Q969G3 411 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 GPATCH3Q96I76 525 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 ORC3Q9UBD5 711 aaPredicted RBP7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 DLC1Q96QB1 1528 aa7.49□□□□□ -1.21
SRGAP2-211ENST00000604423 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 POGZQ7Z3K3 1410 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 SURF6O75683 361 aaKnown RBP7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 ZRANB2O95218 330 aaKnown RBP eCLIP7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 OS9Q13438 667 aaPredicted RBP7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 GNL2Q13823 731 aaKnown RBP7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 SMC1AQ14683 1233 aaKnown RBP7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 G2E3Q7L622 706 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 SH3RF1Q7Z6J0 888 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 AOPEPQ8N6M6 819 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 PI4K2BQ8TCG2 481 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
SRGAP2-211ENST00000604423 EFCAB8A8MWE9 144 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 IVLP07476 585 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 KCNJ6P48051 423 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 LMAN1P49257 510 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ST5P78524 1137 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 FLIIQ13045 1269 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 RRS1Q15050 365 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ADCK5Q3MIX3 580 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 SULT6B1Q6IMI4 303 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 BLOC1S2Q6QNY1 142 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 SRLQ86TD4 932 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 CCDC34Q96HJ3 373 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 OSBPL5Q9H0X9 879 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ATP13A2Q9NQ11 1180 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 GEMIN8Q9NWZ8 242 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 DNAI1Q9UI46 699 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 TPCN1Q9ULQ1 816 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 RRP15Q9Y3B9 282 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 A0A1B0GUL7 405 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 CAPN5O15484 640 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 DHX16O60231 1041 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 URI1O94763 535 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ADH1CP00326 375 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ST3GAL1Q11201 340 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 TTC31Q49AM3 519 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 CCDC93Q567U6 631 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 HSP90AB4PQ58FF6 505 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ICE2Q659A1 982 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 E4F1Q66K89 784 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 LARP1Q6PKG0 1096 aaKnown RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 NME9Q86XW9 330 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 FBXO18Q8NFZ0 1043 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 PGBD1Q96JS3 809 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 TMX1Q9H3N1 280 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ZSCAN16Q9H4T2 348 aaPredicted RBP7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 ARFGAP3Q9NP61 516 aa7.47□□□□□ -1.21
SRGAP2-211ENST00000604423 MON2Q7Z3U7 1717 aa7.46□□□□□ -1.21
SRGAP2-211ENST00000604423 TTC41PQ6P2S7 1318 aa7.46□□□□□ -1.21
SRGAP2-211ENST00000604423 MAP3K5Q99683 1374 aa7.46□□□□□ -1.21
SRGAP2-211ENST00000604423 GIGYF1O75420 1035 aaPredicted RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 SEC31AO94979 1220 aaKnown RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 FSHRP23945 695 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 EVCP57679 992 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 STK3Q13188 491 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 LRRFIP1Q32MZ4 808 aaKnown RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 CCDC30Q5VVM6 783 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 DHX40Q8IX18 779 aaKnown RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 LRRN4CLQ8ND94 238 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 EXOC4Q96A65 974 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 SLC26A8Q96RN1 970 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 ARHGAP9Q9BRR9 750 aa7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 RBM8AQ9Y5S9 174 aaKnown RBP7.46□□□□□ -1.22
SRGAP2-211ENST00000604423 HIP1O00291 1037 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 TADA3O75528 432 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 NOP2P46087 812 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 ETF1P62495 437 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 PTH1RQ03431 593 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 CEBPZQ03701 1054 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 CREB3L3Q68CJ9 461 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 DDX54Q8TDD1 881 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 ZBTB9Q96C00 473 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 SYTL4Q96C24 671 aaPredicted RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 CARD6Q9BX69 1037 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 PSD3Q9NYI0 1048 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 CRB1P82279 1406 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 SRGAP3O43295 1099 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 ZSCAN12O43309 604 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 NR3C2P08235 984 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 ACTN2P35609 894 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms