RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
RPS28-204ENST00000602140 CAP1Q01518 475 aa16.38■□□□□ 0.21
RPS28-204ENST00000602140 DCAF15Q66K64 600 aa16.38■□□□□ 0.21
RPS28-204ENST00000602140 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
RPS28-204ENST00000602140 MYH13Q9UKX3 1938 aa16.38■□□□□ 0.21
RPS28-204ENST00000602140 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 LDHBP07195 334 aaKnown RBP16.37■□□□□ 0.21
RPS28-204ENST00000602140 CETPP11597 493 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 PHKA1P46020 1223 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 TCP10Q12799 353 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
RPS28-204ENST00000602140 FAM151AQ8WW52 585 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 DENND2AQ9ULE3 1009 aa16.37■□□□□ 0.21
RPS28-204ENST00000602140 CENPFP49454 3210 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 IRF6O14896 467 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 ADORA1P30542 326 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 INPP5BP32019 993 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 NFIAQ12857 509 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 PPIL2Q13356 520 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
RPS28-204ENST00000602140 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
RPS28-204ENST00000602140 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 SEMA3EO15041 775 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 SNAPC2Q13487 334 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
RPS28-204ENST00000602140 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
RPS28-204ENST00000602140 TIMM10P62072 90 aa16.34■□□□□ 0.21
RPS28-204ENST00000602140 PPATQ06203 517 aa16.34■□□□□ 0.21
RPS28-204ENST00000602140 ARHGEF6Q15052 776 aa16.34■□□□□ 0.21
RPS28-204ENST00000602140 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
RPS28-204ENST00000602140 TLR2O60603 784 aa16.33■□□□□ 0.2
RPS28-204ENST00000602140 GNAI3P08754 354 aa16.33■□□□□ 0.2
RPS28-204ENST00000602140 ZGPATQ8N5A5 531 aaKnown RBP16.33■□□□□ 0.2
RPS28-204ENST00000602140 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.2
RPS28-204ENST00000602140 ARMC5Q96C12 935 aa16.33■□□□□ 0.2
RPS28-204ENST00000602140 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
RPS28-204ENST00000602140 ZNF112Q9UJU3 913 aa16.33■□□□□ 0.2
RPS28-204ENST00000602140 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
RPS28-204ENST00000602140 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
RPS28-204ENST00000602140 ZFPM1Q8IX07 1006 aa16.32■□□□□ 0.2
RPS28-204ENST00000602140 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
RPS28-204ENST00000602140 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 ZBTB22O15209 634 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 TFCP2Q12800 502 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 DZIP1Q86YF9 867 aaKnown RBP16.31■□□□□ 0.2
RPS28-204ENST00000602140 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
RPS28-204ENST00000602140 GAKO14976 1311 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 MKI67P46013 3256 aaKnown RBP16.3■□□□□ 0.2
RPS28-204ENST00000602140 RGS3P49796 1198 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
RPS28-204ENST00000602140 MTX1Q13505 466 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 KIF22Q14807 665 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 ZNF333Q96JL9 665 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 KCNH4Q9UQ05 1017 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
RPS28-204ENST00000602140 BRCA2P51587 3418 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 PDS5AQ29RF7 1337 aaKnown RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 ENTPD3O75355 529 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 TRIM27P14373 513 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 EN2P19622 333 aaPredicted RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 SPTY2D1Q68D10 685 aaPredicted RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 FRAT1Q92837 279 aaPredicted RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
RPS28-204ENST00000602140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.29■□□□□ 0.2
RPS28-204ENST00000602140 PDHXO00330 501 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 BCAR3O75815 825 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 ECM2O94769 699 aaPredicted RBP16.28■□□□□ 0.2
RPS28-204ENST00000602140 C17orf99Q6UX52 265 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 ZSCAN29Q8IWY8 852 aaPredicted RBP16.28■□□□□ 0.2
RPS28-204ENST00000602140 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
RPS28-204ENST00000602140 CPA4Q9UI42 421 aa16.28■□□□□ 0.2
RPS28-204ENST00000602140 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 ZSWIM8A7E2V4 1837 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 PHF20L1A8MW92 1017 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 GNAI2P04899 355 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 BTDP43251 543 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 MOGSQ13724 837 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 SH3BP5LQ7L8J4 393 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms