RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 DZIP1Q86YF9 867 aaKnown RBP21.13■□□□□ 0.97
HERC3-214ENST00000601319 SLF2Q8IX21 1173 aa21.13■□□□□ 0.97
HERC3-214ENST00000601319 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
HERC3-214ENST00000601319 MCAMP43121 646 aa21.12■□□□□ 0.97
HERC3-214ENST00000601319 KIF23Q02241 960 aaPredicted RBP21.12■□□□□ 0.97
HERC3-214ENST00000601319 COL13A1Q5TAT6 717 aaPredicted RBP21.12■□□□□ 0.97
HERC3-214ENST00000601319 SIRT2Q8IXJ6 389 aa21.12■□□□□ 0.97
HERC3-214ENST00000601319 FAM163AQ96GL9 167 aaPredicted RBP21.12■□□□□ 0.97
HERC3-214ENST00000601319 TMEM39BQ9GZU3 492 aa21.12■□□□□ 0.97
HERC3-214ENST00000601319 ABCF2Q9UG63 623 aa21.12■□□□□ 0.97
HERC3-214ENST00000601319 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
HERC3-214ENST00000601319 EXOC6BQ9Y2D4 811 aa21.12■□□□□ 0.97
HERC3-214ENST00000601319 CACNB3P54284 484 aa21.11■□□□□ 0.97
HERC3-214ENST00000601319 PRKG1Q13976 671 aa21.11■□□□□ 0.97
HERC3-214ENST00000601319 CCDC158Q5M9N0 1113 aa21.11■□□□□ 0.97
HERC3-214ENST00000601319 PI16Q6UXB8 463 aa21.11■□□□□ 0.97
HERC3-214ENST00000601319 MROH7-TTC4A0A0A0MT08 1334 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 IGSF3O75054 1194 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 IREB2P48200 963 aaKnown RBP21.1■□□□□ 0.97
HERC3-214ENST00000601319 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 CDC42EP5Q6NZY7 148 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 ERICH6Q7L0X2 663 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 CDAN1Q8IWY9 1227 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 EAF2Q96CJ1 260 aaPredicted RBP21.1■□□□□ 0.97
HERC3-214ENST00000601319 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 SAGE1Q9NXZ1 904 aa21.1■□□□□ 0.97
HERC3-214ENST00000601319 USP2O75604 605 aaPredicted RBP21.09■□□□□ 0.97
HERC3-214ENST00000601319 LBX1P52954 281 aa21.09■□□□□ 0.97
HERC3-214ENST00000601319 FZD1Q9UP38 647 aa21.09■□□□□ 0.97
HERC3-214ENST00000601319 MECOMQ03112 1051 aa21.08■□□□□ 0.97
HERC3-214ENST00000601319 ANKRD13AQ8IZ07 590 aa21.08■□□□□ 0.97
HERC3-214ENST00000601319 ZNF384Q8TF68 577 aa21.08■□□□□ 0.97
HERC3-214ENST00000601319 FAM151AQ8WW52 585 aa21.08■□□□□ 0.97
HERC3-214ENST00000601319 TLR7Q9NYK1 1049 aaKnown RBP21.08■□□□□ 0.97
HERC3-214ENST00000601319 ZBTB48P10074 688 aaPredicted RBP21.07■□□□□ 0.96
HERC3-214ENST00000601319 GSTO1P78417 241 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 SPRYD7Q5W111 196 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 RHPN1Q8TCX5 695 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 NSUN4Q96CB9 384 aaKnown RBP21.07■□□□□ 0.96
HERC3-214ENST00000601319 KIF1BPQ96EK5 621 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 IDI2Q9BXS1 227 aa21.07■□□□□ 0.96
HERC3-214ENST00000601319 CASP8AP2Q9UKL3 1982 aa21.06■□□□□ 0.96
HERC3-214ENST00000601319 RAB11FIP3O75154 756 aa21.06■□□□□ 0.96
HERC3-214ENST00000601319 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
HERC3-214ENST00000601319 CLMNQ96JQ2 1002 aa21.06■□□□□ 0.96
HERC3-214ENST00000601319 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
HERC3-214ENST00000601319 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
HERC3-214ENST00000601319 USP40Q9NVE5 1235 aa21.06■□□□□ 0.96
HERC3-214ENST00000601319 COL2A1P02458 1487 aaPredicted RBP21.06■□□□□ 0.96
HERC3-214ENST00000601319 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 MAP4K4O95819 1239 aaPredicted RBP21.05■□□□□ 0.96
HERC3-214ENST00000601319 LDHCP07864 332 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 NFIAQ12857 509 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 TBC1D9Q6ZT07 1266 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 AACSQ86V21 672 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.05■□□□□ 0.96
HERC3-214ENST00000601319 SLC10A4Q96EP9 437 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 WNK4Q96J92 1243 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 FAM198AQ9UFP1 575 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 MYH7P12883 1935 aa21.05■□□□□ 0.96
HERC3-214ENST00000601319 ENTPD3O75355 529 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 BTDP43251 543 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 TM4SF4P48230 202 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 SREBF2Q12772 1141 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 DCAF15Q66K64 600 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 LRP2BPQ9P2M1 347 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 DOCK1Q14185 1865 aa21.04■□□□□ 0.96
HERC3-214ENST00000601319 ATRNL1Q5VV63 1379 aa21.03■□□□□ 0.96
HERC3-214ENST00000601319 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
HERC3-214ENST00000601319 CYP2E1P05181 493 aaPredicted RBP21.03■□□□□ 0.96
HERC3-214ENST00000601319 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.03■□□□□ 0.96
HERC3-214ENST00000601319 CLASRPQ8N2M8 674 aaKnown RBP21.03■□□□□ 0.96
HERC3-214ENST00000601319 IL1RAPL2Q9NP60 686 aa21.03■□□□□ 0.96
HERC3-214ENST00000601319 SNRKQ9NRH2 765 aa21.03■□□□□ 0.96
HERC3-214ENST00000601319 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
HERC3-214ENST00000601319 RAI14Q9P0K7 980 aa21.03■□□□□ 0.96
HERC3-214ENST00000601319 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
HERC3-214ENST00000601319 ZAP70P43403 619 aa21.02■□□□□ 0.96
HERC3-214ENST00000601319 RGS3P49796 1198 aa21.02■□□□□ 0.96
HERC3-214ENST00000601319 RHBDL3P58872 404 aa21.02■□□□□ 0.96
HERC3-214ENST00000601319 TNS4Q8IZW8 715 aa21.02■□□□□ 0.96
HERC3-214ENST00000601319 TSKSQ9UJT2 592 aa21.02■□□□□ 0.96
HERC3-214ENST00000601319 SIPA1L1O43166 1804 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 ATAD5Q96QE3 1844 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 MANSC4A6NHS7 340 aaPredicted RBP21.01■□□□□ 0.95
HERC3-214ENST00000601319 MAP3K9P80192 1104 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 TCP10Q12799 353 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 VGLL4Q14135 290 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
HERC3-214ENST00000601319 CSADQ9Y600 493 aa21.01■□□□□ 0.95
HERC3-214ENST00000601319 INHBEP58166 350 aa21■□□□□ 0.95
HERC3-214ENST00000601319 MKRN3Q13064 507 aaKnown RBP21■□□□□ 0.95
HERC3-214ENST00000601319 IFFO2Q5TF58 517 aa21■□□□□ 0.95
HERC3-214ENST00000601319 ZNF341Q9BYN7 854 aa21■□□□□ 0.95
HERC3-214ENST00000601319 DDX60LQ5H9U9 1706 aaKnown RBP20.99■□□□□ 0.95
HERC3-214ENST00000601319 TRPA1O75762 1119 aa20.99■□□□□ 0.95
HERC3-214ENST00000601319 NAA16Q6N069 864 aaPredicted RBP20.99■□□□□ 0.95
HERC3-214ENST00000601319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.99■□□□□ 0.95
HERC3-214ENST00000601319 WRNIP1Q96S55 665 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms