RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 CASP8AP2Q9UKL3 1982 aa20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 TRPA1O75762 1119 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 CDC42EP5Q6NZY7 148 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 ANKRD13AQ8IZ07 590 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 CLMNQ96JQ2 1002 aa20.69■□□□□ 0.9
NOTCH3-205ENST00000600841 SREBF2Q12772 1141 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 DBNDD2Q9BQY9 259 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 ZBTB40Q9NUA8 1239 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 USP40Q9NVE5 1235 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 AK9Q5TCS8 1911 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 OTOFQ9HC10 1997 aa20.68■□□□□ 0.9
NOTCH3-205ENST00000600841 MCAMP43121 646 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 PDE3AQ14432 1141 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 PI16Q6UXB8 463 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 ERC1Q8IUD2 1116 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 WNK4Q96J92 1243 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 GAKO14976 1311 aa20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
NOTCH3-205ENST00000600841 ZBTB48P10074 688 aaPredicted RBP20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 TM4SF4P48230 202 aa20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
NOTCH3-205ENST00000600841 HMMRO75330 724 aa20.65■□□□□ 0.9
NOTCH3-205ENST00000600841 MECOMQ03112 1051 aa20.65■□□□□ 0.9
NOTCH3-205ENST00000600841 TCP10Q12799 353 aa20.65■□□□□ 0.9
NOTCH3-205ENST00000600841 TBC1D9Q6ZT07 1266 aa20.65■□□□□ 0.9
NOTCH3-205ENST00000600841 FAM163AQ96GL9 167 aaPredicted RBP20.65■□□□□ 0.9
NOTCH3-205ENST00000600841 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 MANSC4A6NHS7 340 aaPredicted RBP20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 GSTO1P78417 241 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 MAP3K9P80192 1104 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 NFIAQ12857 509 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 ELP3Q9H9T3 547 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 RAI14Q9P0K7 980 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 DBNLQ9UJU6 430 aaKnown RBP20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 CSADQ9Y600 493 aa20.64■□□□□ 0.89
NOTCH3-205ENST00000600841 BTDP43251 543 aa20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 EAF2Q96CJ1 260 aaPredicted RBP20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 ZNF512BQ96KM6 892 aaPredicted RBP20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 SNRKQ9NRH2 765 aa20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 LRP2BPQ9P2M1 347 aa20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 FAM198AQ9UFP1 575 aa20.63■□□□□ 0.89
NOTCH3-205ENST00000600841 LDHCP07864 332 aa20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 INHBEP58166 350 aa20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 VGLL4Q14135 290 aa20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 NSUN4Q96CB9 384 aaKnown RBP20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 OPTNQ96CV9 577 aa20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 TLR7Q9NYK1 1049 aaKnown RBP20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 LAMB1P07942 1786 aa20.62■□□□□ 0.89
NOTCH3-205ENST00000600841 CAPN15O75808 1086 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 AACSQ86V21 672 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 SIRT2Q8IXJ6 389 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 ZNF384Q8TF68 577 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 WRNIP1Q96S55 665 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
NOTCH3-205ENST00000600841 GPR75-ASB3A0A0A6YYF3 556 aa20.6■□□□□ 0.89
NOTCH3-205ENST00000600841 ENTPD3O75355 529 aa20.6■□□□□ 0.89
NOTCH3-205ENST00000600841 GJA5P36382 358 aa20.6■□□□□ 0.89
NOTCH3-205ENST00000600841 RGS3P49796 1198 aa20.6■□□□□ 0.89
NOTCH3-205ENST00000600841 MIGA2Q7L4E1 593 aa20.6■□□□□ 0.89
NOTCH3-205ENST00000600841 TBC1D8O95759 1140 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 ALDH1A1P00352 501 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 ZFPM1Q8IX07 1006 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 RHPN1Q8TCX5 695 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 IL1RAPL2Q9NP60 686 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
NOTCH3-205ENST00000600841 DOCK2Q92608 1830 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 APBB1O00213 710 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 WDHD1O75717 1129 aaPredicted RBP20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 MAP4K4O95819 1239 aaPredicted RBP20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 CYP2E1P05181 493 aaPredicted RBP20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 ZAP70P43403 619 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 IFNL1Q8IU54 200 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 MAST2Q6P0Q8 1798 aa20.58■□□□□ 0.89
NOTCH3-205ENST00000600841 RAB11FIP3O75154 756 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 RHBDL3P58872 404 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 PICALMQ13492 652 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 OTUD7BQ6GQQ9 843 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 ZSCAN29Q8IWY8 852 aaPredicted RBP20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 CLASRPQ8N2M8 674 aaKnown RBP20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 OTUD5Q96G74 571 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms