RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 UBE2Q2LH0YL09 131 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 SLC10A3P09131 477 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 ECE1P42892 770 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 NFIAQ12857 509 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 MAP3K11Q16584 847 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 SPTY2D1Q68D10 685 aaPredicted RBP19.3■□□□□ 0.68
RPS28-203ENST00000600659 DZIP1Q86YF9 867 aaKnown RBP19.3■□□□□ 0.68
RPS28-203ENST00000600659 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 CLASRPQ8N2M8 674 aaKnown RBP19.3■□□□□ 0.68
RPS28-203ENST00000600659 PIH1D3Q9NQM4 214 aaKnown RBP19.3■□□□□ 0.68
RPS28-203ENST00000600659 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
RPS28-203ENST00000600659 SMARCA5O60264 1052 aaPredicted RBP19.29■□□□□ 0.68
RPS28-203ENST00000600659 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
RPS28-203ENST00000600659 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
RPS28-203ENST00000600659 LDLRAD1Q5T700 205 aa19.29■□□□□ 0.68
RPS28-203ENST00000600659 PAXIP1Q6ZW49 1069 aaPredicted RBP19.29■□□□□ 0.68
RPS28-203ENST00000600659 FAM83AQ86UY5 434 aa19.29■□□□□ 0.68
RPS28-203ENST00000600659 FAM198AQ9UFP1 575 aa19.29■□□□□ 0.68
RPS28-203ENST00000600659 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
RPS28-203ENST00000600659 GPR75-ASB3A0A0A6YYF3 556 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 NF2P35240 595 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 RHBDL3P58872 404 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 GRM1Q13255 1194 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 PRKG1Q13976 671 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 ANTXR1Q9H6X2 564 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 WBP1LQ9NX94 342 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 MYH7P12883 1935 aa19.28■□□□□ 0.68
RPS28-203ENST00000600659 WDHD1O75717 1129 aaPredicted RBP19.27■□□□□ 0.68
RPS28-203ENST00000600659 BTDP43251 543 aa19.27■□□□□ 0.68
RPS28-203ENST00000600659 ADGRA1Q86SQ6 560 aa19.27■□□□□ 0.68
RPS28-203ENST00000600659 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.68
RPS28-203ENST00000600659 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
RPS28-203ENST00000600659 USP2O75604 605 aaPredicted RBP19.26■□□□□ 0.67
RPS28-203ENST00000600659 MAP2K2P36507 400 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
RPS28-203ENST00000600659 SUPT20HL1Q3ZLR7 823 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 ZFPM1Q8IX07 1006 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.26■□□□□ 0.67
RPS28-203ENST00000600659 IDI2Q9BXS1 227 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 TMOD2Q9NZR1 351 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 ANGEL1Q9UNK9 670 aaKnown RBP19.26■□□□□ 0.67
RPS28-203ENST00000600659 ATRNL1Q5VV63 1379 aa19.26■□□□□ 0.67
RPS28-203ENST00000600659 IFIT2P09913 472 aaKnown RBP19.25■□□□□ 0.67
RPS28-203ENST00000600659 TNNI2P48788 182 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 ARMC9Q7Z3E5 817 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 FAM151AQ8WW52 585 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 DDX4Q9NQI0 724 aaKnown RBP19.25■□□□□ 0.67
RPS28-203ENST00000600659 LRP2BPQ9P2M1 347 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 NOGQ13253 232 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 TTLL12Q14166 644 aaPredicted RBP19.25■□□□□ 0.67
RPS28-203ENST00000600659 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
RPS28-203ENST00000600659 SH3BP5LQ7L8J4 393 aa19.24■□□□□ 0.67
RPS28-203ENST00000600659 CCDC102AQ96A19 550 aa19.24■□□□□ 0.67
RPS28-203ENST00000600659 DDX60LQ5H9U9 1706 aaKnown RBP19.23■□□□□ 0.67
RPS28-203ENST00000600659 FOXN1O15353 648 aa19.23■□□□□ 0.67
RPS28-203ENST00000600659 IGSF3O75054 1194 aa19.23■□□□□ 0.67
RPS28-203ENST00000600659 RGS3P49796 1198 aa19.23■□□□□ 0.67
RPS28-203ENST00000600659 GSTO1P78417 241 aa19.23■□□□□ 0.67
RPS28-203ENST00000600659 TCP10Q12799 353 aa19.23■□□□□ 0.67
RPS28-203ENST00000600659 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
RPS28-203ENST00000600659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■□□□□ 9.4
RPS28-203ENST00000600659 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
RPS28-203ENST00000600659 PPP1R12BO60237 982 aaPredicted RBP19.22■□□□□ 0.67
RPS28-203ENST00000600659 ATP5JP18859 108 aa19.22■□□□□ 0.67
RPS28-203ENST00000600659 KIF23Q02241 960 aaPredicted RBP19.22■□□□□ 0.67
RPS28-203ENST00000600659 NAA16Q6N069 864 aaPredicted RBP19.22■□□□□ 0.67
RPS28-203ENST00000600659 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.22■□□□□ 0.67
RPS28-203ENST00000600659 COL2A1P02458 1487 aaPredicted RBP19.21■□□□□ 0.67
RPS28-203ENST00000600659 UNCXA6NJT0 531 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 ENTPD3O75355 529 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 LDHCP07864 332 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 PPP4CP60510 307 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 MAP2K1Q02750 393 aaPredicted RBP19.21■□□□□ 0.67
RPS28-203ENST00000600659 AAMPQ13685 434 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
RPS28-203ENST00000600659 SALL3Q9BXA9 1300 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 DDTLA6NHG4 134 aaPredicted RBP19.2■□□□□ 0.66
RPS28-203ENST00000600659 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
RPS28-203ENST00000600659 IDH1O75874 414 aaKnown RBP19.2■□□□□ 0.66
RPS28-203ENST00000600659 SLURP2P0DP57 97 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 GJA5P36382 358 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 OTUD7AQ8TE49 926 aaPredicted RBP19.2■□□□□ 0.66
RPS28-203ENST00000600659 SH3RF3Q8TEJ3 882 aaPredicted RBP19.2■□□□□ 0.66
RPS28-203ENST00000600659 CSRNP1Q96S65 589 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 HAUS7Q99871 368 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 BOLA2Q9H3K6 86 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 AATFQ9NY61 560 aaKnown RBP eCLIP19.2■□□□□ 0.661e-6■□□□□ 10
RPS28-203ENST00000600659 MYH1P12882 1939 aa19.2■□□□□ 0.66
RPS28-203ENST00000600659 GOLIM4O00461 696 aa19.19■□□□□ 0.66
RPS28-203ENST00000600659 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
RPS28-203ENST00000600659 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
RPS28-203ENST00000600659 ANKRD13AQ8IZ07 590 aa19.19■□□□□ 0.66
RPS28-203ENST00000600659 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
RPS28-203ENST00000600659 PHIPQ8WWQ0 1821 aa19.19■□□□□ 0.66
RPS28-203ENST00000600659 DOCK1Q14185 1865 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms