RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 GAKO14976 1311 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 UNCXA6NJT0 531 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 MECOMQ03112 1051 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 RASAL3Q86YV0 1011 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 ZNF384Q8TF68 577 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 SNRKQ9NRH2 765 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 USP40Q9NVE5 1235 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 FZD1Q9UP38 647 aa16.52■□□□□ 0.24
ARHGEF1-222ENST00000600517 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
ARHGEF1-222ENST00000600517 CTCFP49711 727 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 AACSQ86V21 672 aa16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 CDAN1Q8IWY9 1227 aa16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 BEGAINQ9BUH8 593 aa16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
ARHGEF1-222ENST00000600517 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 IGSF3O75054 1194 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 LDHCP07864 332 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 GSTO1P78417 241 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 FAM151AQ8WW52 585 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
ARHGEF1-222ENST00000600517 MROH7-TTC4A0A0A0MT08 1334 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 APBB1O00213 710 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 CA12O43570 354 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 ZAP70P43403 619 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 NFIAQ12857 509 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 CSRNP1Q96S65 589 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 RAI14Q9P0K7 980 aa16.49■□□□□ 0.23
ARHGEF1-222ENST00000600517 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 ANKRD13AQ8IZ07 590 aa16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 CLMNQ96JQ2 1002 aa16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
ARHGEF1-222ENST00000600517 ENTPD3O75355 529 aa16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 MAP4K4O95819 1239 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 BTDP43251 543 aa16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 SPRYD7Q5W111 196 aa16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 DCTPP1Q9H773 170 aa16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 PIH1D3Q9NQM4 214 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-222ENST00000600517 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 LBX1P52954 281 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 RHBDL3P58872 404 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 TCP10Q12799 353 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 PCDHB15Q9Y5E8 787 aa16.46■□□□□ 0.23
ARHGEF1-222ENST00000600517 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 TM4SF4P48230 202 aa16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 RGS3P49796 1198 aa16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.229e-7■■■■□ 25.5
ARHGEF1-222ENST00000600517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZBTB48P10074 688 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 PPP4CP60510 307 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 DCAF15Q66K64 600 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 WNK4Q96J92 1243 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 RNF186Q9NXI6 227 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 SAGE1Q9NXZ1 904 aa16.44■□□□□ 0.22
ARHGEF1-222ENST00000600517 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 INHBEP58166 350 aa16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 ANTXR1Q9H6X2 564 aa16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 DDX4Q9NQI0 724 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-222ENST00000600517 TRPA1O75762 1119 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 BAG3O95817 575 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 SREBF2Q12772 1141 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 VGLL4Q14135 290 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 ELP3Q9H9T3 547 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 CSADQ9Y600 493 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
ARHGEF1-222ENST00000600517 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 IDH1O75874 414 aaKnown RBP16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 ATP5JP18859 108 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 GJA5P36382 358 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms