RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FAM151AQ8WW52 585 aa19.55■□□□□ 0.72
VRK3-221ENST00000600284 OPTNQ96CV9 577 aa19.55■□□□□ 0.72
VRK3-221ENST00000600284 XAGE2Q96GT9 111 aa19.55■□□□□ 0.72
VRK3-221ENST00000600284 ELP3Q9H9T3 547 aa19.55■□□□□ 0.72
VRK3-221ENST00000600284 PNMA6EA0A0J9YXQ4 647 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 IGF2BP3O00425 579 aaKnown RBP eCLIP19.54■□□□□ 0.72
VRK3-221ENST00000600284 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 VGLL4Q14135 290 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 DIXDC1Q155Q3 683 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
VRK3-221ENST00000600284 CDC42EP5Q6NZY7 148 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 SLF2Q8IX21 1173 aa19.54■□□□□ 0.72
VRK3-221ENST00000600284 LAMB1P07942 1786 aa19.53■□□□□ 0.72
VRK3-221ENST00000600284 FTSJ3Q8IY81 847 aaKnown RBP19.53■□□□□ 0.72
VRK3-221ENST00000600284 FAM163AQ96GL9 167 aaPredicted RBP19.53■□□□□ 0.72
VRK3-221ENST00000600284 GTF2A2P52657 109 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 ATP8B2P98198 1209 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 POLA2Q14181 598 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 MS4A4AQ96JQ5 239 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 NEUROD6Q96NK8 337 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 R3HDMLQ9H3Y0 253 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 USP40Q9NVE5 1235 aa19.52■□□□□ 0.72
VRK3-221ENST00000600284 SSH3Q8TE77 659 aa19.51■□□□□ 0.71
VRK3-221ENST00000600284 PTPN18Q99952 460 aa19.51■□□□□ 0.71
VRK3-221ENST00000600284 ZNF341Q9BYN7 854 aa19.51■□□□□ 0.71
VRK3-221ENST00000600284 ABCF2Q9UG63 623 aa19.51■□□□□ 0.71
VRK3-221ENST00000600284 GAKO14976 1311 aa19.51■□□□□ 0.71
VRK3-221ENST00000600284 SPDYE5A6NIY4 337 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
VRK3-221ENST00000600284 GORABQ5T7V8 394 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 ERO1BQ86YB8 467 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 DZIP1Q86YF9 867 aaKnown RBP19.5■□□□□ 0.71
VRK3-221ENST00000600284 WRNIP1Q96S55 665 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 GPR108Q9NPR9 543 aa19.5■□□□□ 0.71
VRK3-221ENST00000600284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.5■□□□□ 0.71
VRK3-221ENST00000600284 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
VRK3-221ENST00000600284 FAM198AQ9UFP1 575 aa19.49■□□□□ 0.71
VRK3-221ENST00000600284 ZNF112Q9UJU3 913 aa19.49■□□□□ 0.71
VRK3-221ENST00000600284 SNCAIPQ9Y6H5 919 aa19.49■□□□□ 0.71
VRK3-221ENST00000600284 OTOFQ9HC10 1997 aa19.49■□□□□ 0.71
VRK3-221ENST00000600284 ENTPD3O75355 529 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 ARID4AP29374 1257 aaPredicted RBP19.48■□□□□ 0.71
VRK3-221ENST00000600284 TCP10Q12799 353 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 NFIAQ12857 509 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 SPATA5Q8NB90 893 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 ZKSCAN4Q969J2 545 aaPredicted RBP19.48■□□□□ 0.71
VRK3-221ENST00000600284 OTUD5Q96G74 571 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 HMG20BQ9P0W2 317 aa19.48■□□□□ 0.71
VRK3-221ENST00000600284 CCL15-CCL14A0A0B4J2E2 113 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 UQCRFS1P1P0C7P4 283 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 MLLT1Q03111 559 aaPredicted RBP19.47■□□□□ 0.71
VRK3-221ENST00000600284 PPATQ06203 517 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 CRHR2Q13324 411 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 CCL15Q16663 113 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 FBXO46Q6PJ61 603 aaPredicted RBP19.47■□□□□ 0.71
VRK3-221ENST00000600284 MIGA2Q7L4E1 593 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 BRI3BPQ8WY22 251 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 HPS5Q9UPZ3 1129 aa19.47■□□□□ 0.71
VRK3-221ENST00000600284 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
VRK3-221ENST00000600284 MAP4K4O95819 1239 aaPredicted RBP19.46■□□□□ 0.71
VRK3-221ENST00000600284 LDHCP07864 332 aa19.46■□□□□ 0.71
VRK3-221ENST00000600284 CETPP11597 493 aa19.46■□□□□ 0.71
VRK3-221ENST00000600284 RLBP1P12271 317 aa19.46■□□□□ 0.71
VRK3-221ENST00000600284 PPIL2Q13356 520 aa19.46■□□□□ 0.71
VRK3-221ENST00000600284 ERO1AQ96HE7 468 aa19.46■□□□□ 0.71
VRK3-221ENST00000600284 ZCCHC17Q9NP64 241 aaKnown RBP19.46■□□□□ 0.71
VRK3-221ENST00000600284 GPR75-ASB3A0A0A6YYF3 556 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 SURF6O75683 361 aaKnown RBP19.45■□□□□ 0.7
VRK3-221ENST00000600284 MS4A1P11836 297 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 GSTO1P78417 241 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 MECOMQ03112 1051 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 OS9Q13438 667 aaPredicted RBP19.45■□□□□ 0.7
VRK3-221ENST00000600284 SNAPC2Q13487 334 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 TNNI3KQ59H18 835 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 ZFYVE28Q9HCC9 887 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 FPGT-TNNI3KV9GXZ4 949 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 MROH7-TTC4A0A0A0MT08 1334 aa19.45■□□□□ 0.7
VRK3-221ENST00000600284 IRF6O14896 467 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 IGSF3O75054 1194 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
VRK3-221ENST00000600284 WDHD1O75717 1129 aaPredicted RBP19.44■□□□□ 0.7
VRK3-221ENST00000600284 BTDP43251 543 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 RGS3P49796 1198 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 SP3Q02447 781 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 CCDC158Q5M9N0 1113 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 NOL9Q5SY16 702 aaKnown RBP19.44■□□□□ 0.7
VRK3-221ENST00000600284 MYH2Q9UKX2 1941 aa19.44■□□□□ 0.7
VRK3-221ENST00000600284 INPP5BP32019 993 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 MCAMP43121 646 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 MAP3K10Q02779 954 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 TAF1CQ15572 869 aaPredicted RBP19.43■□□□□ 0.7
VRK3-221ENST00000600284 ZFPM1Q8IX07 1006 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 NSUN4Q96CB9 384 aaKnown RBP19.43■□□□□ 0.7
VRK3-221ENST00000600284 ZNF512BQ96KM6 892 aaPredicted RBP19.43■□□□□ 0.7
VRK3-221ENST00000600284 C1orf115Q9H7X2 142 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 RFX7Q2KHR2 1363 aa19.43■□□□□ 0.7
VRK3-221ENST00000600284 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms