RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 ZNF512BQ96KM6 892 aaPredicted RBP9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 PRDM10Q9NQV6 1147 aa9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 ABCF2Q9UG63 623 aa9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 DBNLQ9UJU6 430 aaKnown RBP9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 EXOC6BQ9Y2D4 811 aa9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 FOCADQ5VW36 1801 aa9.81□□□□□ -0.84
CHMP2A-205ENST00000600006 HSP90AB4PQ58FF6 505 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 CCDC158Q5M9N0 1113 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 TTC39AQ5SRH9 613 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 CDC42EP5Q6NZY7 148 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 DZIP1Q86YF9 867 aaKnown RBP9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 ZNF384Q8TF68 577 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 BEGAINQ9BUH8 593 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 TMEM39BQ9GZU3 492 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 TLR7Q9NYK1 1049 aaKnown RBP9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 MROH7-TTC4A0A0A0MT08 1334 aa9.8□□□□□ -0.84
CHMP2A-205ENST00000600006 PCNTO95613 3336 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 USP2O75604 605 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 LBX1P52954 281 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 RRP1P56182 461 aaKnown RBP9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 MECOMQ03112 1051 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 RHPN1Q8TCX5 695 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 FAM151AQ8WW52 585 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 SAGE1Q9NXZ1 904 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 AK9Q5TCS8 1911 aa9.79□□□□□ -0.84
CHMP2A-205ENST00000600006 IGSF3O75054 1194 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 ZBTB48P10074 688 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 IREB2P48200 963 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 NFIAQ12857 509 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 ANKRD13AQ8IZ07 590 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 NSUN4Q96CB9 384 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 HOOK2Q96ED9 719 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 KIF1BPQ96EK5 621 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 CLMNQ96JQ2 1002 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 CSRNP1Q96S65 589 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 IDI2Q9BXS1 227 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 USP40Q9NVE5 1235 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-205ENST00000600006 SIPA1L1O43166 1804 aa9.77□□□□□ -0.84
CHMP2A-205ENST00000600006 ATRNL1Q5VV63 1379 aa9.77□□□□□ -0.84
CHMP2A-205ENST00000600006 DOCK1Q14185 1865 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 GPR75-ASB3A0A0A6YYF3 556 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 CYP2E1P05181 493 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 BTDP43251 543 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 ZAP70P43403 619 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 RHBDL3P58872 404 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 GSTO1P78417 241 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 AACSQ86V21 672 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 WNK4Q96J92 1243 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 IL1RAPL2Q9NP60 686 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 SNRKQ9NRH2 765 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 RAI14Q9P0K7 980 aa9.77□□□□□ -0.85
CHMP2A-205ENST00000600006 MYH7P12883 1935 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 ENTPD3O75355 529 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 MAP4K4O95819 1239 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 LDHCP07864 332 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 TM4SF4P48230 202 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 RGS3P49796 1198 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 SREBF2Q12772 1141 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 TCP10Q12799 353 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 VGLL4Q14135 290 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 CLASRPQ8N2M8 674 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 PIH1D3Q9NQM4 214 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 RNF186Q9NXI6 227 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 DDX60LQ5H9U9 1706 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-205ENST00000600006 ATAD5Q96QE3 1844 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 SPDYE5A6NIY4 337 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 GJA5P36382 358 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 MKRN3Q13064 507 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 ZNF341Q9BYN7 854 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 DDX4Q9NQI0 724 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 CSADQ9Y600 493 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 SNCAIPQ9Y6H5 919 aa9.75□□□□□ -0.85
CHMP2A-205ENST00000600006 PHIPQ8WWQ0 1821 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms