RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 HOOK2Q96ED9 719 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 SRCIN1Q9C0H9 1055 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 OSBPP22059 807 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 INPP5BP32019 993 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 BCAMP50895 628 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 DCAF15Q66K64 600 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 MIGA2Q7L4E1 593 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 ANKRD23Q86SG2 305 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 ZNF341Q9BYN7 854 aa15.54■□□□□ 0.08
HOMER3-211ENST00000599808 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
HOMER3-211ENST00000599808 PDHXO00330 501 aa15.53■□□□□ 0.08
HOMER3-211ENST00000599808 PDE8BO95263 885 aa15.53■□□□□ 0.08
HOMER3-211ENST00000599808 GRK4P32298 578 aa15.53■□□□□ 0.08
HOMER3-211ENST00000599808 UBE2Q1Q7Z7E8 422 aa15.53■□□□□ 0.08
HOMER3-211ENST00000599808 RAET1EQ8TD07 263 aa15.53■□□□□ 0.08
HOMER3-211ENST00000599808 BICC1Q9H694 974 aaKnown RBP15.53■□□□□ 0.08
HOMER3-211ENST00000599808 UTYO14607 1347 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 MAST3O60307 1309 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 MYPNQ86TC9 1320 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 FMNL1O95466 1100 aaPredicted RBP15.52■□□□□ 0.08
HOMER3-211ENST00000599808 GJB1P08034 283 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 HOXD10P28358 340 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 GJA8P48165 433 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 MOGSQ13724 837 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
HOMER3-211ENST00000599808 HHIPL2Q6UWX4 724 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 NKX2-3Q8TAU0 364 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 KCNH4Q9UQ05 1017 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
HOMER3-211ENST00000599808 CCL5P13501 91 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 PRO3102Q9H379 93 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 ZNF112Q9UJU3 913 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 DOCK3Q8IZD9 2030 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 PTPRFP10586 1907 aa15.51■□□□□ 0.07
HOMER3-211ENST00000599808 TCP10Q12799 353 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 FAM151AQ8WW52 585 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 HTATIP2Q9BUP3 242 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 RNF208Q9H0X6 261 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 LAMA3Q16787 3333 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 COL6A3P12111 3177 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 DOCK2Q92608 1830 aa15.5■□□□□ 0.07
HOMER3-211ENST00000599808 BCRP11274 1271 aa15.49■□□□□ 0.07
HOMER3-211ENST00000599808 FGFR2P21802 821 aa15.49■□□□□ 0.07
HOMER3-211ENST00000599808 PRKCZQ05513 592 aa15.49■□□□□ 0.07
HOMER3-211ENST00000599808 BIN2Q9UBW5 565 aaPredicted RBP15.49■□□□□ 0.07
HOMER3-211ENST00000599808 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 UBXN2AP68543 259 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 NFIAQ12857 509 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
HOMER3-211ENST00000599808 GPAT2Q6NUI2 795 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 CDC42EP5Q6NZY7 148 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 U2AF1L4Q8WU68 220 aaKnown RBP15.48■□□□□ 0.07
HOMER3-211ENST00000599808 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
HOMER3-211ENST00000599808 DAGLAQ9Y4D2 1042 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 ALPK3Q96L96 1907 aa15.48■□□□□ 0.07
HOMER3-211ENST00000599808 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
HOMER3-211ENST00000599808 CYP2C8P10632 490 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 FCGRTP55899 365 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
HOMER3-211ENST00000599808 DIXDC1Q155Q3 683 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 WDR66Q8TBY9 1149 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 UNC93B1Q9H1C4 597 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 GABRQQ9UN88 632 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
HOMER3-211ENST00000599808 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
HOMER3-211ENST00000599808 FARP2O94887 1054 aaPredicted RBP15.46■□□□□ 0.07
HOMER3-211ENST00000599808 SLAIN1Q8ND83 568 aa15.46■□□□□ 0.07
HOMER3-211ENST00000599808 MRS2Q9HD23 443 aa15.46■□□□□ 0.07
HOMER3-211ENST00000599808 FAM198AQ9UFP1 575 aa15.46■□□□□ 0.07
HOMER3-211ENST00000599808 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
HOMER3-211ENST00000599808 CXCL11O14625 94 aa15.45■□□□□ 0.06
HOMER3-211ENST00000599808 SGPL1O95470 568 aa15.45■□□□□ 0.06
HOMER3-211ENST00000599808 PRDX5P30044 214 aa15.45■□□□□ 0.06
HOMER3-211ENST00000599808 ZFPM1Q8IX07 1006 aa15.45■□□□□ 0.06
HOMER3-211ENST00000599808 DOCK1Q14185 1865 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 A0A0G2JLL6 359 aaPredicted RBP15.44■□□□□ 0.06
HOMER3-211ENST00000599808 ADCY3O60266 1144 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 SLC5A1P13866 664 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
HOMER3-211ENST00000599808 PRRT2Q7Z6L0 340 aaPredicted RBP15.44■□□□□ 0.06
HOMER3-211ENST00000599808 LPIN2Q92539 896 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 USP40Q9NVE5 1235 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
HOMER3-211ENST00000599808 PHF20L1A8MW92 1017 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 EYA2O00167 538 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 SOX1O00570 391 aaPredicted RBP15.43■□□□□ 0.06
HOMER3-211ENST00000599808 ELNP15502 786 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 RFX5P48382 616 aaPredicted RBP15.43■□□□□ 0.06
HOMER3-211ENST00000599808 FLT3LGP49771 235 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 FASTKD5Q7L8L6 764 aaKnown RBP15.43■□□□□ 0.06
HOMER3-211ENST00000599808 USP44Q9H0E7 712 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms