RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZBTB40Q9NUA8 1239 aa27.78■■■□□ 2.04
CCDC9-204ENST00000599398 PDE3AQ14432 1141 aa27.77■■■□□ 2.04
CCDC9-204ENST00000599398 CCDC158Q5M9N0 1113 aa27.77■■■□□ 2.04
CCDC9-204ENST00000599398 FKBP1CQ5VVH2 108 aa27.77■■■□□ 2.04
CCDC9-204ENST00000599398 CDC42EP5Q6NZY7 148 aa27.77■■■□□ 2.04
CCDC9-204ENST00000599398 ERICH6Q7L0X2 663 aa27.77■■■□□ 2.04
CCDC9-204ENST00000599398 REM2Q8IYK8 340 aaPredicted RBP27.77■■■□□ 2.04
CCDC9-204ENST00000599398 MCAMP43121 646 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 FAM83AQ86UY5 434 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 SLF2Q8IX21 1173 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 RPAP2Q8IXW5 612 aaPredicted RBP27.76■■■□□ 2.03
CCDC9-204ENST00000599398 CLMNQ96JQ2 1002 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 USP40Q9NVE5 1235 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 AK9Q5TCS8 1911 aa27.76■■■□□ 2.03
CCDC9-204ENST00000599398 HMMRO75330 724 aa27.75■■■□□ 2.03
CCDC9-204ENST00000599398 TBC1D9Q6ZT07 1266 aa27.75■■■□□ 2.03
CCDC9-204ENST00000599398 ERC1Q8IUD2 1116 aa27.75■■■□□ 2.03
CCDC9-204ENST00000599398 TRPA1O75762 1119 aa27.74■■■□□ 2.03
CCDC9-204ENST00000599398 HSP90AB4PQ58FF6 505 aa27.74■■■□□ 2.03
CCDC9-204ENST00000599398 ANKRD13AQ8IZ07 590 aa27.74■■■□□ 2.03
CCDC9-204ENST00000599398 CCDC8Q9H0W5 538 aaPredicted RBP27.74■■■□□ 2.03
CCDC9-204ENST00000599398 RNF186Q9NXI6 227 aa27.74■■■□□ 2.03
CCDC9-204ENST00000599398 MECOMQ03112 1051 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 TCP10Q12799 353 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 SPRYD7Q5W111 196 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 SNRKQ9NRH2 765 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 SAGE1Q9NXZ1 904 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 OTOFQ9HC10 1997 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 CASP8AP2Q9UKL3 1982 aa27.73■■■□□ 2.03
CCDC9-204ENST00000599398 GAKO14976 1311 aa27.72■■■□□ 2.03
CCDC9-204ENST00000599398 UNCXA6NJT0 531 aa27.72■■■□□ 2.03
CCDC9-204ENST00000599398 EAF2Q96CJ1 260 aaPredicted RBP27.72■■■□□ 2.03
CCDC9-204ENST00000599398 HOOK2Q96ED9 719 aa27.72■■■□□ 2.03
CCDC9-204ENST00000599398 TLR7Q9NYK1 1049 aaKnown RBP27.72■■■□□ 2.03
CCDC9-204ENST00000599398 RAI14Q9P0K7 980 aa27.72■■■□□ 2.03
CCDC9-204ENST00000599398 DBNLQ9UJU6 430 aaKnown RBP27.72■■■□□ 2.03
CCDC9-204ENST00000599398 NFIAQ12857 509 aa27.71■■■□□ 2.03
CCDC9-204ENST00000599398 FAM151AQ8WW52 585 aa27.71■■■□□ 2.03
CCDC9-204ENST00000599398 WNK4Q96J92 1243 aa27.71■■■□□ 2.03
CCDC9-204ENST00000599398 LRP2BPQ9P2M1 347 aa27.71■■■□□ 2.03
CCDC9-204ENST00000599398 APBB1O00213 710 aa27.7■■■□□ 2.02
CCDC9-204ENST00000599398 SREBF2Q12772 1141 aa27.7■■■□□ 2.02
CCDC9-204ENST00000599398 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.02
CCDC9-204ENST00000599398 RPAP1Q9BWH6 1393 aaPredicted RBP27.7■■■□□ 2.02
CCDC9-204ENST00000599398 MROH7-TTC4A0A0A0MT08 1334 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 BTDP43251 543 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 GSTO1P78417 241 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 AACSQ86V21 672 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 FAM163AQ96GL9 167 aaPredicted RBP27.69■■■□□ 2.02
CCDC9-204ENST00000599398 ELP3Q9H9T3 547 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 IL1RAPL2Q9NP60 686 aa27.69■■■□□ 2.02
CCDC9-204ENST00000599398 ZBTB48P10074 688 aaPredicted RBP27.68■■■□□ 2.02
CCDC9-204ENST00000599398 MAP3K9P80192 1104 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 DCAF15Q66K64 600 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 RHPN1Q8TCX5 695 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 NSUN4Q96CB9 384 aaKnown RBP27.68■■■□□ 2.02
CCDC9-204ENST00000599398 BCL11AQ9H165 835 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 FAM198AQ9UFP1 575 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 CSADQ9Y600 493 aa27.68■■■□□ 2.02
CCDC9-204ENST00000599398 LDHCP07864 332 aa27.67■■■□□ 2.02
CCDC9-204ENST00000599398 TM4SF4P48230 202 aa27.67■■■□□ 2.02
CCDC9-204ENST00000599398 ZNF384Q8TF68 577 aa27.67■■■□□ 2.02
CCDC9-204ENST00000599398 ZNF512BQ96KM6 892 aaPredicted RBP27.67■■■□□ 2.02
CCDC9-204ENST00000599398 RGS3P49796 1198 aa27.66■■■□□ 2.02
CCDC9-204ENST00000599398 VGLL4Q14135 290 aa27.66■■■□□ 2.02
CCDC9-204ENST00000599398 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.66■■■□□ 2.02
CCDC9-204ENST00000599398 MIGA2Q7L4E1 593 aa27.66■■■□□ 2.02
CCDC9-204ENST00000599398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.66■■■□□ 2.02
CCDC9-204ENST00000599398 WRNIP1Q96S55 665 aa27.66■■■□□ 2.02
CCDC9-204ENST00000599398 MANSC4A6NHS7 340 aaPredicted RBP27.65■■■□□ 2.02
CCDC9-204ENST00000599398 ZAP70P43403 619 aa27.65■■■□□ 2.02
CCDC9-204ENST00000599398 OPTNQ96CV9 577 aa27.65■■■□□ 2.02
CCDC9-204ENST00000599398 KIF1BPQ96EK5 621 aa27.65■■■□□ 2.02
CCDC9-204ENST00000599398 IDI2Q9BXS1 227 aa27.65■■■□□ 2.02
CCDC9-204ENST00000599398 GPR75-ASB3A0A0A6YYF3 556 aa27.64■■■□□ 2.02
CCDC9-204ENST00000599398 CYP2E1P05181 493 aaPredicted RBP27.64■■■□□ 2.02
CCDC9-204ENST00000599398 CLASRPQ8N2M8 674 aaKnown RBP27.64■■■□□ 2.02
CCDC9-204ENST00000599398 ZNF341Q9BYN7 854 aa27.64■■■□□ 2.02
CCDC9-204ENST00000599398 MYO5AQ9Y4I1 1855 aaKnown RBP27.64■■■□□ 2.01
CCDC9-204ENST00000599398 ENTPD3O75355 529 aa27.63■■■□□ 2.01
CCDC9-204ENST00000599398 CAPN15O75808 1086 aa27.63■■■□□ 2.01
CCDC9-204ENST00000599398 GJA5P36382 358 aa27.63■■■□□ 2.01
CCDC9-204ENST00000599398 PICALMQ13492 652 aa27.63■■■□□ 2.01
CCDC9-204ENST00000599398 ZFPM1Q8IX07 1006 aa27.63■■■□□ 2.01
CCDC9-204ENST00000599398 RAB11FIP3O75154 756 aa27.62■■■□□ 2.01
CCDC9-204ENST00000599398 INHBEP58166 350 aa27.62■■■□□ 2.01
CCDC9-204ENST00000599398 NAA16Q6N069 864 aaPredicted RBP27.62■■■□□ 2.01
CCDC9-204ENST00000599398 ZSCAN29Q8IWY8 852 aaPredicted RBP27.62■■■□□ 2.01
CCDC9-204ENST00000599398 NOL10Q9BSC4 688 aaKnown RBP27.62■■■□□ 2.01
CCDC9-204ENST00000599398 MAST2Q6P0Q8 1798 aa27.61■■■□□ 2.01
CCDC9-204ENST00000599398 WDHD1O75717 1129 aaPredicted RBP27.61■■■□□ 2.01
CCDC9-204ENST00000599398 TBC1D8O95759 1140 aa27.61■■■□□ 2.01
CCDC9-204ENST00000599398 CNKSR2Q8WXI2 1034 aa27.61■■■□□ 2.01
CCDC9-204ENST00000599398 ZKSCAN4Q969J2 545 aaPredicted RBP27.61■■■□□ 2.01
CCDC9-204ENST00000599398 DDX4Q9NQI0 724 aaKnown RBP27.61■■■□□ 2.01
CCDC9-204ENST00000599398 RFX7Q2KHR2 1363 aa27.6■■■□□ 2.01
CCDC9-204ENST00000599398 IFIT2P09913 472 aaKnown RBP27.6■■■□□ 2.01
CCDC9-204ENST00000599398 RHBDL3P58872 404 aa27.6■■■□□ 2.01
CCDC9-204ENST00000599398 OTUD5Q96G74 571 aa27.6■■■□□ 2.01
CCDC9-204ENST00000599398 PIH1D3Q9NQM4 214 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms