RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 DACT2Q5SW24 774 aa27.76■■■□□ 2.04
SYMPK-212ENST00000598896 STRIP1Q5VSL9 837 aa27.76■■■□□ 2.04
SYMPK-212ENST00000598896 SUGT1Q9Y2Z0 365 aa27.76■■■□□ 2.04
SYMPK-212ENST00000598896 PSME4Q14997 1843 aa27.76■■■□□ 2.03
SYMPK-212ENST00000598896 F8W031 263 aaPredicted RBP27.76■■■□□ 2.03
SYMPK-212ENST00000598896 BLOC1S2Q6QNY1 142 aa27.76■■■□□ 2.03
SYMPK-212ENST00000598896 BAZ2AQ9UIF9 1905 aaKnown RBP27.76■■■□□ 2.03
SYMPK-212ENST00000598896 SRCAPQ6ZRS2 3230 aa27.75■■■□□ 2.03
SYMPK-212ENST00000598896 TCEANC2Q96MN5 208 aa27.75■■■□□ 2.03
SYMPK-212ENST00000598896 NACAP1Q9BZK3 213 aa27.75■■■□□ 2.03
SYMPK-212ENST00000598896 ADAMTSL1Q8N6G6 1762 aa27.75■■■□□ 2.03
SYMPK-212ENST00000598896 GAKO14976 1311 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 LDHCP07864 332 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 RPS6KB1P23443 525 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 TDO2P48775 406 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 AK2P54819 239 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 NOL8Q76FK4 1167 aaKnown RBP27.74■■■□□ 2.03
SYMPK-212ENST00000598896 LARGE2Q8N3Y3 721 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 SPRYD3Q8NCJ5 442 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 PDRG1Q9NUG6 133 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 ARFGEF1Q9Y6D6 1849 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 USP17L3A6NCW0 530 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 USP17L4A6NCW7 530 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 NFKBIEO00221 500 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 USP17L1Q7RTZ2 530 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 TBC1D10CQ8IV04 446 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 IL27Q8NEV9 243 aa27.74■■■□□ 2.03
SYMPK-212ENST00000598896 FAM163AQ96GL9 167 aaPredicted RBP27.74■■■□□ 2.03
SYMPK-212ENST00000598896 PPP4CP60510 307 aa27.73■■■□□ 2.03
SYMPK-212ENST00000598896 TAOK3Q9H2K8 898 aa27.73■■■□□ 2.03
SYMPK-212ENST00000598896 TTF2Q9UNY4 1162 aaKnown RBP27.73■■■□□ 2.03
SYMPK-212ENST00000598896 TIAM2Q8IVF5 1701 aa27.73■■■□□ 2.03
SYMPK-212ENST00000598896 GPR75-ASB3A0A0A6YYF3 556 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 BTDP43251 543 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 FKBP1AP62942 108 aaKnown RBP27.72■■■□□ 2.03
SYMPK-212ENST00000598896 SH3RF3Q8TEJ3 882 aaPredicted RBP27.72■■■□□ 2.03
SYMPK-212ENST00000598896 CRNKL1Q9BZJ0 848 aaKnown RBP27.72■■■□□ 2.03
SYMPK-212ENST00000598896 FHDC1Q9C0D6 1143 aaPredicted RBP27.72■■■□□ 2.03
SYMPK-212ENST00000598896 VPS33BQ9H267 617 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 UTRNP46939 3433 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 CDK5RAP2Q96SN8 1893 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 IARSP41252 1262 aaKnown RBP27.72■■■□□ 2.03
SYMPK-212ENST00000598896 MCM2P49736 904 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 DAGLAQ9Y4D2 1042 aa27.72■■■□□ 2.03
SYMPK-212ENST00000598896 BAG3O95817 575 aa27.71■■■□□ 2.03
SYMPK-212ENST00000598896 LARP6Q9BRS8 491 aaKnown RBP27.71■■■□□ 2.03
SYMPK-212ENST00000598896 SCNN1DP51172 638 aa27.7■■■□□ 2.03
SYMPK-212ENST00000598896 SLF2Q8IX21 1173 aa27.7■■■□□ 2.03
SYMPK-212ENST00000598896 DCP1AQ9NPI6 582 aaPredicted RBP27.7■■■□□ 2.03
SYMPK-212ENST00000598896 TMX3Q96JJ7 454 aa27.7■■■□□ 2.02
SYMPK-212ENST00000598896 SMIM22K7EJ46 135 aa27.69■■■□□ 2.02
SYMPK-212ENST00000598896 CTDSPL2Q05D32 466 aa27.69■■■□□ 2.02
SYMPK-212ENST00000598896 GIMAP6Q6P9H5 292 aa27.69■■■□□ 2.02
SYMPK-212ENST00000598896 KIAA0825Q8IV33 1275 aa27.69■■■□□ 2.02
SYMPK-212ENST00000598896 NOL10Q9BSC4 688 aaKnown RBP27.69■■■□□ 2.02
SYMPK-212ENST00000598896 TACC3Q9Y6A5 838 aa27.69■■■□□ 2.02
SYMPK-212ENST00000598896 HMGB1P09429 215 aaKnown RBP27.68■■■□□ 2.02
SYMPK-212ENST00000598896 NKX2-3Q8TAU0 364 aa27.68■■■□□ 2.02
SYMPK-212ENST00000598896 ATP8A2Q9NTI2 1148 aa27.68■■■□□ 2.02
SYMPK-212ENST00000598896 RHBDL3P58872 404 aa27.68■■■□□ 2.02
SYMPK-212ENST00000598896 DHX32Q7L7V1 743 aaKnown RBP27.68■■■□□ 2.02
SYMPK-212ENST00000598896 SLKQ9H2G2 1235 aaPredicted RBP27.68■■■□□ 2.02
SYMPK-212ENST00000598896 MKRN1Q9UHC7 482 aaKnown RBP27.68■■■□□ 2.02
SYMPK-212ENST00000598896 LAMB1P07942 1786 aa27.68■■■□□ 2.02
SYMPK-212ENST00000598896 PPARAQ07869 468 aa27.67■■■□□ 2.02
SYMPK-212ENST00000598896 TOB2Q14106 344 aaPredicted RBP27.67■■■□□ 2.02
SYMPK-212ENST00000598896 CTR9Q6PD62 1173 aa27.67■■■□□ 2.02
SYMPK-212ENST00000598896 INCENPQ9NQS7 918 aa27.67■■■□□ 2.02
SYMPK-212ENST00000598896 NEDD4P46934 1319 aa27.67■■■□□ 2.02
SYMPK-212ENST00000598896 CYP2D7A0A087X1C5 515 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 RAD17O75943 681 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 EXOSC10Q01780 885 aaKnown RBP27.66■■■□□ 2.02
SYMPK-212ENST00000598896 NIM1KQ8IY84 436 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 MB21D2Q8IYB1 491 aaPredicted RBP27.66■■■□□ 2.02
SYMPK-212ENST00000598896 LRRC2Q9BYS8 371 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 ALDH8A1Q9H2A2 487 aaPredicted RBP27.66■■■□□ 2.02
SYMPK-212ENST00000598896 FOXD4L1Q9NU39 408 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 NAV1Q8NEY1 1877 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 RASSF7Q02833 373 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 EVX2Q03828 476 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 CHST3Q7LGC8 479 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 NCOA7Q8NI08 942 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 ZNRF3Q9ULT6 936 aa27.66■■■□□ 2.02
SYMPK-212ENST00000598896 LTBP3Q9NS15 1303 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 FOCADQ5VW36 1801 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 MINDY4BA8MYZ0 360 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 USP17L12C9JPN9 530 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 USP17L21D6R901 530 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 CERS3Q8IU89 383 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 TGFBRAP1Q8WUH2 860 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 LIMCH1Q9UPQ0 1083 aa27.65■■■□□ 2.02
SYMPK-212ENST00000598896 DDX60LQ5H9U9 1706 aaKnown RBP27.64■■■□□ 2.02
SYMPK-212ENST00000598896 USP5P45974 858 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 PRELPP51888 382 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 AKNAD1Q5T1N1 836 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 HHIPL2Q6UWX4 724 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 TEKT1Q969V4 418 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 ANAPC4Q9UJX5 808 aa27.64■■■□□ 2.02
SYMPK-212ENST00000598896 PSMD14O00487 310 aa27.64■■■□□ 2.01
SYMPK-212ENST00000598896 LARGE1O95461 756 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms