RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 IFNL1Q8IU54 200 aa28.41■■■□□ 2.14
SSBP4-205ENST00000598159 SSH3Q8TE77 659 aa28.41■■■□□ 2.14
SSBP4-205ENST00000598159 FAM151AQ8WW52 585 aa28.41■■■□□ 2.14
SSBP4-205ENST00000598159 CCDC85CA6NKD9 419 aa28.4■■■□□ 2.14
SSBP4-205ENST00000598159 SLF2Q8IX21 1173 aa28.4■■■□□ 2.14
SSBP4-205ENST00000598159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.4■■■□□ 2.14
SSBP4-205ENST00000598159 ELP3Q9H9T3 547 aa28.4■■■□□ 2.14
SSBP4-205ENST00000598159 CSADQ9Y600 493 aa28.4■■■□□ 2.14
SSBP4-205ENST00000598159 GPR25O00155 361 aa28.39■■■□□ 2.14
SSBP4-205ENST00000598159 OTUD7BQ6GQQ9 843 aa28.39■■■□□ 2.14
SSBP4-205ENST00000598159 OPTNQ96CV9 577 aa28.39■■■□□ 2.14
SSBP4-205ENST00000598159 USP40Q9NVE5 1235 aa28.39■■■□□ 2.14
SSBP4-205ENST00000598159 ABCF2Q9UG63 623 aa28.39■■■□□ 2.14
SSBP4-205ENST00000598159 MS4A1P11836 297 aa28.38■■■□□ 2.13
SSBP4-205ENST00000598159 GJA5P36382 358 aa28.38■■■□□ 2.13
SSBP4-205ENST00000598159 DCAF15Q66K64 600 aa28.38■■■□□ 2.13
SSBP4-205ENST00000598159 CTU1Q7Z7A3 348 aaKnown RBP28.38■■■□□ 2.13
SSBP4-205ENST00000598159 ZNF296Q8WUU4 475 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-205ENST00000598159 FAM163AQ96GL9 167 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-205ENST00000598159 GPR108Q9NPR9 543 aa28.38■■■□□ 2.13
SSBP4-205ENST00000598159 RPAP1Q9BWH6 1393 aaPredicted RBP28.37■■■□□ 2.13
SSBP4-205ENST00000598159 DZIP1Q86YF9 867 aaKnown RBP28.37■■■□□ 2.13
SSBP4-205ENST00000598159 MYH2Q9UKX2 1941 aa28.36■■■□□ 2.13
SSBP4-205ENST00000598159 TESPA1A2RU30 521 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-205ENST00000598159 SURF6O75683 361 aaKnown RBP28.36■■■□□ 2.13
SSBP4-205ENST00000598159 VGLL4Q14135 290 aa28.36■■■□□ 2.13
SSBP4-205ENST00000598159 ERICH6Q7L0X2 663 aa28.36■■■□□ 2.13
SSBP4-205ENST00000598159 C1orf115Q9H7X2 142 aa28.36■■■□□ 2.13
SSBP4-205ENST00000598159 LAMB1P07942 1786 aa28.36■■■□□ 2.13
SSBP4-205ENST00000598159 UQCRFS1P1P0C7P4 283 aa28.35■■■□□ 2.13
SSBP4-205ENST00000598159 ARID4AP29374 1257 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-205ENST00000598159 OS9Q13438 667 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-205ENST00000598159 HMG20BQ9P0W2 317 aa28.35■■■□□ 2.13
SSBP4-205ENST00000598159 NOP58Q9Y2X3 529 aaKnown RBP28.35■■■□□ 2.13
SSBP4-205ENST00000598159 GAKO14976 1311 aa28.35■■■□□ 2.13
SSBP4-205ENST00000598159 OTOFQ9HC10 1997 aa28.34■■■□□ 2.13
SSBP4-205ENST00000598159 IGF2BP3O00425 579 aaKnown RBP eCLIP28.34■■■□□ 2.13
SSBP4-205ENST00000598159 TCP10Q12799 353 aa28.34■■■□□ 2.13
SSBP4-205ENST00000598159 PKN2Q16513 984 aaKnown RBP28.34■■■□□ 2.13
SSBP4-205ENST00000598159 SPATA5Q8NB90 893 aa28.34■■■□□ 2.13
SSBP4-205ENST00000598159 ZNF341Q9BYN7 854 aa28.34■■■□□ 2.13
SSBP4-205ENST00000598159 AK9Q5TCS8 1911 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 FKTNO75072 461 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 NFIAQ12857 509 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 MS4A4AQ96JQ5 239 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 WRNIP1Q96S55 665 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 IDI2Q9BXS1 227 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 R3HDMLQ9H3Y0 253 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 FAM198AQ9UFP1 575 aa28.33■■■□□ 2.13
SSBP4-205ENST00000598159 GTF2A2P52657 109 aa28.32■■■□□ 2.12
SSBP4-205ENST00000598159 TNNI3KQ59H18 835 aa28.32■■■□□ 2.12
SSBP4-205ENST00000598159 MIGA2Q7L4E1 593 aa28.32■■■□□ 2.12
SSBP4-205ENST00000598159 FPGT-TNNI3KV9GXZ4 949 aa28.32■■■□□ 2.12
SSBP4-205ENST00000598159 CCDC158Q5M9N0 1113 aa28.31■■■□□ 2.12
SSBP4-205ENST00000598159 ERO1BQ86YB8 467 aa28.31■■■□□ 2.12
SSBP4-205ENST00000598159 PANK1Q8TE04 598 aa28.31■■■□□ 2.12
SSBP4-205ENST00000598159 PTPN18Q99952 460 aa28.31■■■□□ 2.12
SSBP4-205ENST00000598159 SPDYE5A6NIY4 337 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 ENTPD3O75355 529 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 LDHCP07864 332 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 GSTO1P78417 241 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 MECOMQ03112 1051 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 CNKSR2Q8WXI2 1034 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 ZKSCAN4Q969J2 545 aaPredicted RBP28.3■■■□□ 2.12
SSBP4-205ENST00000598159 OTUD5Q96G74 571 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 SNCAIPQ9Y6H5 919 aa28.3■■■□□ 2.12
SSBP4-205ENST00000598159 ZNF112Q9UJU3 913 aa28.29■■■□□ 2.12
SSBP4-205ENST00000598159 MROH7-TTC4A0A0A0MT08 1334 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 GPR75-ASB3A0A0A6YYF3 556 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 MCAMP43121 646 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 BTDP43251 543 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 TTC39AQ5SRH9 613 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 CEP85Q6P2H3 762 aa28.28■■■□□ 2.12
SSBP4-205ENST00000598159 RGS3P49796 1198 aa28.27■■■□□ 2.12
SSBP4-205ENST00000598159 PI16Q6UXB8 463 aa28.27■■■□□ 2.12
SSBP4-205ENST00000598159 TBC1D9Q6ZT07 1266 aa28.27■■■□□ 2.12
SSBP4-205ENST00000598159 ZFPM1Q8IX07 1006 aa28.27■■■□□ 2.12
SSBP4-205ENST00000598159 NSUN4Q96CB9 384 aaKnown RBP28.27■■■□□ 2.12
SSBP4-205ENST00000598159 CCL15-CCL14A0A0B4J2E2 113 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 MAP4K4O95819 1239 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-205ENST00000598159 RGS19P49795 217 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 CCL15Q16663 113 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 BRI3BPQ8WY22 251 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 ZNF512BQ96KM6 892 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-205ENST00000598159 DBNDD2Q9BQY9 259 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 RAI14Q9P0K7 980 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 LRP2BPQ9P2M1 347 aa28.26■■■□□ 2.11
SSBP4-205ENST00000598159 CETPP11597 493 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 INPP5BP32019 993 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 PPATQ06203 517 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 CRHR2Q13324 411 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 ZNF384Q8TF68 577 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 RCAN3Q9UKA8 241 aa28.25■■■□□ 2.11
SSBP4-205ENST00000598159 WDHD1O75717 1129 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-205ENST00000598159 PPIL2Q13356 520 aa28.24■■■□□ 2.11
SSBP4-205ENST00000598159 ZSCAN29Q8IWY8 852 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-205ENST00000598159 IRF6O14896 467 aa28.23■■■□□ 2.11
SSBP4-205ENST00000598159 IGSF3O75054 1194 aa28.23■■■□□ 2.11
SSBP4-205ENST00000598159 NPM3O75607 178 aaKnown RBP28.23■■■□□ 2.11
SSBP4-205ENST00000598159 SNAPC2Q13487 334 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms