RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 DOK7Q18PE1 504 aa27.22■■□□□ 1.95
SPTBN4-210ENST00000596900 SOGA3Q5TF21 947 aa27.22■■□□□ 1.95
SPTBN4-210ENST00000596900 TCEANC2Q96MN5 208 aa27.22■■□□□ 1.95
SPTBN4-210ENST00000596900 TIAM2Q8IVF5 1701 aa27.22■■□□□ 1.95
SPTBN4-210ENST00000596900 MROH7-TTC4A0A0A0MT08 1334 aa27.21■■□□□ 1.95
SPTBN4-210ENST00000596900 SDR42E1Q8WUS8 393 aa27.21■■□□□ 1.95
SPTBN4-210ENST00000596900 KCNA3P22001 575 aa27.21■■□□□ 1.95
SPTBN4-210ENST00000596900 Q6ZUG5 572 aa27.21■■□□□ 1.95
SPTBN4-210ENST00000596900 FBXW7Q969H0 707 aa27.21■■□□□ 1.95
SPTBN4-210ENST00000596900 MCM5P33992 734 aa27.2■■□□□ 1.94
SPTBN4-210ENST00000596900 TOB2Q14106 344 aaPredicted RBP27.2■■□□□ 1.94
SPTBN4-210ENST00000596900 ATP8A2Q9NTI2 1148 aa27.2■■□□□ 1.94
SPTBN4-210ENST00000596900 PIM2Q9P1W9 311 aa27.2■■□□□ 1.94
SPTBN4-210ENST00000596900 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.2■■□□□ 1.94
SPTBN4-210ENST00000596900 WDR19Q8NEZ3 1342 aa27.19■■□□□ 1.94
SPTBN4-210ENST00000596900 EXOSC10Q01780 885 aaKnown RBP27.19■■□□□ 1.94
SPTBN4-210ENST00000596900 CNNM2Q9H8M5 875 aa27.19■■□□□ 1.94
SPTBN4-210ENST00000596900 KIAA2012Q0VF49 1180 aa27.19■■□□□ 1.94
SPTBN4-210ENST00000596900 COL9A3Q14050 684 aaPredicted RBP27.19■■□□□ 1.94
SPTBN4-210ENST00000596900 PPP4CP60510 307 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 DIXDC1Q155Q3 683 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 GRIK5Q16478 980 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 TBC1D10CQ8IV04 446 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 PSMD1Q99460 953 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 NBPF3Q9H094 633 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 RNF41Q9H4P4 317 aaPredicted RBP27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 DBNDD1Q9H9R9 158 aa27.18■■□□□ 1.94
SPTBN4-210ENST00000596900 MB21D2Q8IYB1 491 aaPredicted RBP27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 FBXL16Q8N461 479 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 FAM163AQ96GL9 167 aaPredicted RBP27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 LARP6Q9BRS8 491 aaKnown RBP27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 AGXT2Q9BYV1 514 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 TPCN1Q9ULQ1 816 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 ECE2O60344 883 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 PLCG2P16885 1265 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 AKNAD1Q5T1N1 836 aa27.17■■□□□ 1.94
SPTBN4-210ENST00000596900 BAZ2AQ9UIF9 1905 aaKnown RBP27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 PPARAQ07869 468 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 ME3Q16798 604 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 MFSD6Q6ZSS7 791 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 KRT23Q9C075 422 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 ANAPC4Q9UJX5 808 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 CD2APQ9Y5K6 639 aa27.16■■□□□ 1.94
SPTBN4-210ENST00000596900 FKBP1AP62942 108 aaKnown RBP27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 NUCB2P80303 420 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 AOC3Q16853 763 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 STRIP1Q5VSL9 837 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 STAG1Q8WVM7 1258 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 BRF1Q92994 677 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 PSDA5PKW4 1024 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 PPIP5K2O43314 1243 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 SGIP1Q9BQI5 828 aa27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 ARPP21Q9UBL0 812 aaPredicted RBP27.15■■□□□ 1.94
SPTBN4-210ENST00000596900 LAMB1P07942 1786 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 BRCA1P38398 1863 aaKnown RBP27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 GAKO14976 1311 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 GPR75-ASB3A0A0A6YYF3 556 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 PRC1O43663 620 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 LARGE1O95461 756 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 VPS33BQ9H267 617 aa27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 DCP1AQ9NPI6 582 aaPredicted RBP27.14■■□□□ 1.94
SPTBN4-210ENST00000596900 MINDY4BA8MYZ0 360 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 PCP11498 1178 aaKnown RBP27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 BTDP43251 543 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 USP5P45974 858 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 CTDSPL2Q05D32 466 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 DALRD3Q5D0E6 543 aaKnown RBP27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 LRRC2Q9BYS8 371 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 PPP1R1BQ9UD71 204 aaPredicted RBP27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 CCDC83Q8IWF9 413 aa27.13■■□□□ 1.93
SPTBN4-210ENST00000596900 AMOTL1Q8IY63 956 aa27.12■■□□□ 1.93
SPTBN4-210ENST00000596900 TTF2Q9UNY4 1162 aaKnown RBP27.12■■□□□ 1.93
SPTBN4-210ENST00000596900 NEDD4P46934 1319 aa27.12■■□□□ 1.93
SPTBN4-210ENST00000596900 USP17L3A6NCW0 530 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 USP17L4A6NCW7 530 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 CHST3Q7LGC8 479 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 USP17L1Q7RTZ2 530 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 CERS5Q8N5B7 392 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 CHMP4CQ96CF2 233 aa27.11■■□□□ 1.93
SPTBN4-210ENST00000596900 B4E1Z4 1266 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 SLC3A2P08195 630 aaKnown RBP27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 RAB3GAP1Q15042 981 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 SBK1Q52WX2 424 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 CTR9Q6PD62 1173 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 SH3RF3Q8TEJ3 882 aaPredicted RBP27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 TMEM87BQ96K49 555 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 SMC3Q9UQE7 1217 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 NAV1Q8NEY1 1877 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 SCN9AQ15858 1988 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 USP17L12C9JPN9 530 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 USP17L21D6R901 530 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 TOMM22Q9NS69 142 aa27.1■■□□□ 1.93
SPTBN4-210ENST00000596900 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
SPTBN4-210ENST00000596900 ANTXR2P58335 489 aa27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 ZNF274Q96GC6 653 aaPredicted RBP27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 ZNF646O15015 1829 aaPredicted RBP27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 PSME4Q14997 1843 aa27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 CDK5RAP2Q96SN8 1893 aa27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 F8W031 263 aaPredicted RBP27.08■■□□□ 1.93
SPTBN4-210ENST00000596900 PTGER2P43116 358 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms