RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MECOMQ03112 1051 aa25.85■■□□□ 1.73
PNKP-209ENST00000596726 LDLRAD1Q5T700 205 aa25.85■■□□□ 1.73
PNKP-209ENST00000596726 AACSQ86V21 672 aa25.85■■□□□ 1.73
PNKP-209ENST00000596726 TMEM39BQ9GZU3 492 aa25.85■■□□□ 1.73
PNKP-209ENST00000596726 PRKG1Q13976 671 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 RASAL3Q86YV0 1011 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 CDAN1Q8IWY9 1227 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 SLF2Q8IX21 1173 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 ZIC5Q96T25 663 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 SNRKQ9NRH2 765 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 ANGEL1Q9UNK9 670 aaKnown RBP25.84■■□□□ 1.73
PNKP-209ENST00000596726 FZD1Q9UP38 647 aa25.84■■□□□ 1.73
PNKP-209ENST00000596726 APBB1O00213 710 aa25.83■■□□□ 1.73
PNKP-209ENST00000596726 PPP1R12BO60237 982 aaPredicted RBP25.83■■□□□ 1.73
PNKP-209ENST00000596726 CYP2E1P05181 493 aaPredicted RBP25.83■■□□□ 1.73
PNKP-209ENST00000596726 CLASRPQ8N2M8 674 aaKnown RBP25.83■■□□□ 1.73
PNKP-209ENST00000596726 NSUN4Q96CB9 384 aaKnown RBP25.83■■□□□ 1.73
PNKP-209ENST00000596726 USP40Q9NVE5 1235 aa25.82■■□□□ 1.72
PNKP-209ENST00000596726 MROH7-TTC4A0A0A0MT08 1334 aa25.82■■□□□ 1.72
PNKP-209ENST00000596726 FOXN1O15353 648 aa25.81■■□□□ 1.72
PNKP-209ENST00000596726 USP2O75604 605 aaPredicted RBP25.81■■□□□ 1.72
PNKP-209ENST00000596726 ZAP70P43403 619 aa25.81■■□□□ 1.72
PNKP-209ENST00000596726 CRBNQ96SW2 442 aa25.81■■□□□ 1.72
PNKP-209ENST00000596726 PCDHB15Q9Y5E8 787 aa25.81■■□□□ 1.72
PNKP-209ENST00000596726 RPAP1Q9BWH6 1393 aaPredicted RBP25.81■■□□□ 1.72
PNKP-209ENST00000596726 MAST2Q6P0Q8 1798 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 GPR75-ASB3A0A0A6YYF3 556 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 UNCXA6NJT0 531 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 IGSF3O75054 1194 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 FAM151AQ8WW52 585 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 RAI14Q9P0K7 980 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 LRP2BPQ9P2M1 347 aa25.8■■□□□ 1.72
PNKP-209ENST00000596726 LDHCP07864 332 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 GSTO1P78417 241 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 KIF23Q02241 960 aaPredicted RBP25.79■■□□□ 1.72
PNKP-209ENST00000596726 NFIAQ12857 509 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 AIDAQ96BJ3 306 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 DCTPP1Q9H773 170 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 FAM198AQ9UFP1 575 aa25.79■■□□□ 1.72
PNKP-209ENST00000596726 OTOFQ9HC10 1997 aa25.78■■□□□ 1.72
PNKP-209ENST00000596726 BTDP43251 543 aa25.78■■□□□ 1.72
PNKP-209ENST00000596726 IDI2Q9BXS1 227 aa25.78■■□□□ 1.72
PNKP-209ENST00000596726 RFX7Q2KHR2 1363 aa25.78■■□□□ 1.72
PNKP-209ENST00000596726 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
PNKP-209ENST00000596726 IFIT2P09913 472 aaKnown RBP25.77■■□□□ 1.72
PNKP-209ENST00000596726 IREB2P48200 963 aaKnown RBP25.77■■□□□ 1.72
PNKP-209ENST00000596726 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
PNKP-209ENST00000596726 PIH1D3Q9NQM4 214 aaKnown RBP25.77■■□□□ 1.72
PNKP-209ENST00000596726 DOCK2Q92608 1830 aa25.77■■□□□ 1.72
PNKP-209ENST00000596726 RHBDL3P58872 404 aa25.76■■□□□ 1.71
PNKP-209ENST00000596726 WDHD1O75717 1129 aaPredicted RBP25.75■■□□□ 1.71
PNKP-209ENST00000596726 CTCFP49711 727 aaPredicted RBP25.75■■□□□ 1.71
PNKP-209ENST00000596726 TCP10Q12799 353 aa25.75■■□□□ 1.71
PNKP-209ENST00000596726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.75■■□□□ 1.71
PNKP-209ENST00000596726 ENTPD3O75355 529 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 MAP4K4O95819 1239 aaPredicted RBP25.74■■□□□ 1.71
PNKP-209ENST00000596726 NAA16Q6N069 864 aaPredicted RBP25.74■■□□□ 1.71
PNKP-209ENST00000596726 ANKRD13AQ8IZ07 590 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 HOOK2Q96ED9 719 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 CLMNQ96JQ2 1002 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 CSRNP1Q96S65 589 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 BEGAINQ9BUH8 593 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 NDUFB9Q9Y6M9 179 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 LAMB1P07942 1786 aa25.74■■□□□ 1.71
PNKP-209ENST00000596726 SMARCA5O60264 1052 aaPredicted RBP25.73■■□□□ 1.71
PNKP-209ENST00000596726 HSPA8P11142 646 aaKnown RBP25.73■■□□□ 1.71
PNKP-209ENST00000596726 RGS3P49796 1198 aa25.73■■□□□ 1.71
PNKP-209ENST00000596726 ZFPM1Q8IX07 1006 aa25.73■■□□□ 1.71
PNKP-209ENST00000596726 REM2Q8IYK8 340 aaPredicted RBP25.73■■□□□ 1.71
PNKP-209ENST00000596726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.73■■□□□ 1.71
PNKP-209ENST00000596726 SLC10A4Q96EP9 437 aa25.73■■□□□ 1.71
PNKP-209ENST00000596726 ANTXR1Q9H6X2 564 aa25.73■■□□□ 1.71
PNKP-209ENST00000596726 SPRYD7Q5W111 196 aa25.72■■□□□ 1.71
PNKP-209ENST00000596726 DDX4Q9NQI0 724 aaKnown RBP25.72■■□□□ 1.71
PNKP-209ENST00000596726 CA12O43570 354 aa25.71■■□□□ 1.71
PNKP-209ENST00000596726 NPM3O75607 178 aaKnown RBP25.71■■□□□ 1.71
PNKP-209ENST00000596726 PPP4CP60510 307 aa25.71■■□□□ 1.71
PNKP-209ENST00000596726 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.71■■□□□ 1.71
PNKP-209ENST00000596726 CDK5RAP2Q96SN8 1893 aa25.7■■□□□ 1.71
PNKP-209ENST00000596726 MAP3K9P80192 1104 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 AAMPQ13685 434 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 DCAF15Q66K64 600 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 ADGRA1Q86SQ6 560 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 WNK4Q96J92 1243 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 BCL11AQ9H165 835 aa25.7■■□□□ 1.7
PNKP-209ENST00000596726 ATP5JP18859 108 aa25.69■■□□□ 1.7
PNKP-209ENST00000596726 SH3BP5LQ7L8J4 393 aa25.69■■□□□ 1.7
PNKP-209ENST00000596726 PRDM10Q9NQV6 1147 aa25.69■■□□□ 1.7
PNKP-209ENST00000596726 FOCADQ5VW36 1801 aa25.68■■□□□ 1.7
PNKP-209ENST00000596726 IDH1O75874 414 aaKnown RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 ZBTB48P10074 688 aaPredicted RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 TM4SF4P48230 202 aa25.68■■□□□ 1.7
PNKP-209ENST00000596726 LBX1P52954 281 aa25.68■■□□□ 1.7
PNKP-209ENST00000596726 MKRN3Q13064 507 aaKnown RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 TTF1Q15361 905 aaPredicted RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 COL13A1Q5TAT6 717 aaPredicted RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 TMED8Q6PL24 325 aaPredicted RBP25.68■■□□□ 1.7
PNKP-209ENST00000596726 MIGA2Q7L4E1 593 aa25.68■■□□□ 1.7
PNKP-209ENST00000596726 ZNF341Q9BYN7 854 aa25.68■■□□□ 1.7
PNKP-209ENST00000596726 ATRNL1Q5VV63 1379 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms