RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 FKBP1CQ5VVH2 108 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 CDC42EP5Q6NZY7 148 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 ERO1BQ86YB8 467 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 BTBD19C9JJ37 291 aa20.05■□□□□ 0.8
LIM2-202ENST00000596399 CIAO1O76071 339 aa20.05■□□□□ 0.8
LIM2-202ENST00000596399 ECM2O94769 699 aaPredicted RBP20.05■□□□□ 0.8
LIM2-202ENST00000596399 PRPF38BQ5VTL8 546 aaKnown RBP20.05■□□□□ 0.8
LIM2-202ENST00000596399 ZFPM1Q8IX07 1006 aa20.05■□□□□ 0.8
LIM2-202ENST00000596399 ARHGAP39Q9C0H5 1083 aa20.05■□□□□ 0.8
LIM2-202ENST00000596399 ZFYVE28Q9HCC9 887 aa20.05■□□□□ 0.8
LIM2-202ENST00000596399 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
LIM2-202ENST00000596399 FAM151AQ8WW52 585 aa20.04■□□□□ 0.8
LIM2-202ENST00000596399 FAM198AQ9UFP1 575 aa20.04■□□□□ 0.8
LIM2-202ENST00000596399 LDHBP07195 334 aaKnown RBP20.03■□□□□ 0.8
LIM2-202ENST00000596399 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
LIM2-202ENST00000596399 ZNF341Q9BYN7 854 aa20.03■□□□□ 0.8
LIM2-202ENST00000596399 API5Q9BZZ5 524 aaKnown RBP20.03■□□□□ 0.8
LIM2-202ENST00000596399 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
LIM2-202ENST00000596399 PTCH2Q9Y6C5 1203 aa20.03■□□□□ 0.8
LIM2-202ENST00000596399 CETPP11597 493 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 EN2P19622 333 aaPredicted RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 IL15P40933 162 aaPredicted RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 TIMM10P62072 90 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 PPIL2Q13356 520 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 SNAPC2Q13487 334 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 DCAF15Q66K64 600 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 INTS3Q68E01 1043 aaKnown RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 ARMC5Q96C12 935 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 FBXO3Q9UK99 471 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 TNNQ9UQP3 1299 aa20.02■□□□□ 0.8
LIM2-202ENST00000596399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 RPAP1Q9BWH6 1393 aaPredicted RBP20.02■□□□□ 0.8
LIM2-202ENST00000596399 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
LIM2-202ENST00000596399 CCDC102BQ68D86 513 aa20.01■□□□□ 0.79
LIM2-202ENST00000596399 HOOK2Q96ED9 719 aa20.01■□□□□ 0.79
LIM2-202ENST00000596399 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
LIM2-202ENST00000596399 GNL3LQ9NVN8 582 aaKnown RBP20.01■□□□□ 0.79
LIM2-202ENST00000596399 TLR2O60603 784 aa20■□□□□ 0.79
LIM2-202ENST00000596399 MYCP01106 439 aaPredicted RBP20■□□□□ 0.79
LIM2-202ENST00000596399 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
LIM2-202ENST00000596399 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
LIM2-202ENST00000596399 DENND2AQ9ULE3 1009 aa20■□□□□ 0.79
LIM2-202ENST00000596399 PPATQ06203 517 aa19.99■□□□□ 0.79
LIM2-202ENST00000596399 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
LIM2-202ENST00000596399 SALL1Q9NSC2 1324 aa19.99■□□□□ 0.79
LIM2-202ENST00000596399 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 SRGAP3O43295 1099 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 CTGFP29279 349 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 TFCP2Q12800 502 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 ZNF333Q96JL9 665 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 CPA4Q9UI42 421 aa19.98■□□□□ 0.79
LIM2-202ENST00000596399 RGS3P49796 1198 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 LACTBP83111 547 aaPredicted RBP19.97■□□□□ 0.79
LIM2-202ENST00000596399 MOGSQ13724 837 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 SH3BP5LQ7L8J4 393 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 SH3TC2Q8TF17 1288 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
LIM2-202ENST00000596399 A0A1B0GUL7 405 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 SEMA3EO15041 775 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 C17orf99Q6UX52 265 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 XAGE2Q96GT9 111 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 KCNH4Q9UQ05 1017 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 MYH2Q9UKX2 1941 aa19.96■□□□□ 0.79
LIM2-202ENST00000596399 ATRNL1Q5VV63 1379 aa19.95■□□□□ 0.79
LIM2-202ENST00000596399 RBBP6Q7Z6E9 1792 aaKnown RBP19.95■□□□□ 0.78
LIM2-202ENST00000596399 PHF20L1A8MW92 1017 aa19.95■□□□□ 0.78
LIM2-202ENST00000596399 PDHXO00330 501 aa19.95■□□□□ 0.78
LIM2-202ENST00000596399 BCAR3O75815 825 aa19.95■□□□□ 0.78
LIM2-202ENST00000596399 PI16Q6UXB8 463 aa19.95■□□□□ 0.78
LIM2-202ENST00000596399 ZCCHC17Q9NP64 241 aaKnown RBP19.95■□□□□ 0.78
LIM2-202ENST00000596399 DDX4Q9NQI0 724 aaKnown RBP19.95■□□□□ 0.78
LIM2-202ENST00000596399 GAKO14976 1311 aa19.95■□□□□ 0.78
LIM2-202ENST00000596399 KIAA0100Q14667 2235 aaKnown RBP19.95■□□□□ 0.78
LIM2-202ENST00000596399 DDTLA6NHG4 134 aaPredicted RBP19.94■□□□□ 0.78
LIM2-202ENST00000596399 WDHD1O75717 1129 aaPredicted RBP19.94■□□□□ 0.78
LIM2-202ENST00000596399 NOL9Q5SY16 702 aaKnown RBP19.94■□□□□ 0.78
LIM2-202ENST00000596399 ANKRD23Q86SG2 305 aa19.94■□□□□ 0.78
LIM2-202ENST00000596399 DZIP1Q86YF9 867 aaKnown RBP19.94■□□□□ 0.78
LIM2-202ENST00000596399 ZNF384Q8TF68 577 aa19.94■□□□□ 0.78
LIM2-202ENST00000596399 ARHGAP45Q92619 1136 aa19.94■□□□□ 0.78
LIM2-202ENST00000596399 NEUROD6Q96NK8 337 aa19.94■□□□□ 0.78
LIM2-202ENST00000596399 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.94■□□□□ 0.78
LIM2-202ENST00000596399 HDAC5Q9UQL6 1122 aa19.94■□□□□ 0.78
LIM2-202ENST00000596399 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 GNAI3P08754 354 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 TRIM27P14373 513 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 BTDP43251 543 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 PICALMQ13492 652 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 ARHGEF6Q15052 776 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 GPAT2Q6NUI2 795 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 FRAT1Q92837 279 aaPredicted RBP19.93■□□□□ 0.78
LIM2-202ENST00000596399 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 TMEM106CQ9BVX2 250 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 IDI2Q9BXS1 227 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 ADGRA2Q96PE1 1338 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 RFX7Q2KHR2 1363 aa19.93■□□□□ 0.78
LIM2-202ENST00000596399 CYP2C8P10632 490 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms