RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NAA16Q6N069 864 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 CCDC129Q6ZRS4 1044 aa15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 OSBP2Q969R2 916 aa15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 LSG1Q9H089 658 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
SHKBP1-209ENST00000595803 COL4A5P29400 1685 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 TCRBV5S4A2TA0A5A2 114 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 M0R2C6 588 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 ANP32AP39687 249 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 EPS15P42566 896 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 PTH1RQ03431 593 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 DZIP1Q86YF9 867 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 HHIPL1Q96JK4 782 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 PUS7LQ9H0K6 701 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 DBNDD1Q9H9R9 158 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 MAST3O60307 1309 aa15.64■□□□□ 0.09
SHKBP1-209ENST00000595803 ECE2O60344 883 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 CELF2O95319 508 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 LDHCP07864 332 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 SCNN1DP51172 638 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 GSTO1P78417 241 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 LARGE2Q8N3Y3 721 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 MAP4K1Q92918 833 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 GJA3Q9Y6H8 435 aa15.63■□□□□ 0.09
SHKBP1-209ENST00000595803 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 MECOMQ03112 1051 aa15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 HABP4Q5JVS0 413 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 MFSD14BQ5SR56 506 aa15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 NSUN4Q96CB9 384 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 ZIC5Q96T25 663 aa15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 MYH13Q9UKX3 1938 aa15.62■□□□□ 0.09
SHKBP1-209ENST00000595803 MAGEB6P1A0A0J9YX57 407 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 GPAA1O43292 621 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 PRDX5P30044 214 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 HSPA4P34932 840 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 USP50Q70EL3 339 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 DSCC1Q9BVC3 393 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-209ENST00000595803 MYH7P12883 1935 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 USP17L3A6NCW0 530 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 USP17L4A6NCW7 530 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 APPP05067 770 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 NOGQ13253 232 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 STRIP1Q5VSL9 837 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 RNF20Q5VTR2 975 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 USP17L1Q7RTZ2 530 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 STRBPQ96SI9 672 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 NOL10Q9BSC4 688 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 MYO5AQ9Y4I1 1855 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-209ENST00000595803 PATL2C9JE40 543 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 MBD4O95243 580 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 GNAT2P19087 354 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 FKBP1AP62942 108 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 MIGA1Q8NAN2 632 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 KCNQ5Q9NR82 932 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
SHKBP1-209ENST00000595803 BAG3O95817 575 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 ANAPC15P60006 121 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 NECTIN1Q15223 517 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 GRIK5Q16478 980 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 VPS53Q5VIR6 699 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 SAGE1Q9NXZ1 904 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 ZNRF3Q9ULT6 936 aa15.58■□□□□ 0.08
SHKBP1-209ENST00000595803 CREB3L3Q68CJ9 461 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 LCORLQ8N3X6 602 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 ZNF384Q8TF68 577 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 NACAP1Q9BZK3 213 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 ZNF408Q9H9D4 720 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 SLC4A4Q9Y6R1 1079 aa15.57■□□□□ 0.08
SHKBP1-209ENST00000595803 F8W031 263 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 SLC27A2O14975 620 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 DYNLL1P63167 89 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 RABEP1Q15276 862 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 DACT2Q5SW24 774 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 CERS5Q8N5B7 392 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 KCNB2Q92953 911 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 MXD3Q9BW11 206 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 GLIS2Q9BZE0 524 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 AATFQ9NY61 560 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
SHKBP1-209ENST00000595803 MKI67P46013 3256 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms