RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FKBP1CQ5VVH2 108 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 RPAP1Q9BWH6 1393 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 FOXN1O15353 648 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 NFIAQ12857 509 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 NSUN4Q96CB9 384 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 CRBNQ96SW2 442 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
SHKBP1-206ENST00000595523 CASP8AP2Q9UKL3 1982 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 MROH7-TTC4A0A0A0MT08 1334 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 USP2O75604 605 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 ZAP70P43403 619 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 TNNI2P48788 182 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 NOGQ13253 232 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 NDUFB9Q9Y6M9 179 aa13.47□□□□□ -0.25
SHKBP1-206ENST00000595523 BTDP43251 543 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 CLMNQ96JQ2 1002 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 MYH1P12882 1939 aa13.46□□□□□ -0.25
SHKBP1-206ENST00000595523 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 RHBDL3P58872 404 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 ADGRA1Q86SQ6 560 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 ZFPM1Q8IX07 1006 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 CLASRPQ8N2M8 674 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 FAM151AQ8WW52 585 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 ATAD5Q96QE3 1844 aa13.45□□□□□ -0.26
SHKBP1-206ENST00000595523 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 TCP10Q12799 353 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
SHKBP1-206ENST00000595523 PHIPQ8WWQ0 1821 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 PTPRFP10586 1907 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 RGS3P49796 1198 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 GSTO1P78417 241 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
SHKBP1-206ENST00000595523 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 IREB2P48200 963 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 COL13A1Q5TAT6 717 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 NAV1Q8NEY1 1877 aa13.42□□□□□ -0.26
SHKBP1-206ENST00000595523 ENTPD3O75355 529 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 LDHCP07864 332 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 GJA5P36382 358 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 LBX1P52954 281 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 NAA16Q6N069 864 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 ANKRD13AQ8IZ07 590 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-206ENST00000595523 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 IDH1O75874 414 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 ATP5JP18859 108 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 PICALMQ13492 652 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 VGLL4Q14135 290 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms