RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
USE1-205ENST00000594724 SNRKQ9NRH2 765 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 CA12O43570 354 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 TRPA1O75762 1119 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 IREB2P48200 963 aaKnown RBP18.14■□□□□ 0.49
USE1-205ENST00000594724 CCDC158Q5M9N0 1113 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 ERICH6Q7L0X2 663 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 FAM83AQ86UY5 434 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 EAF2Q96CJ1 260 aaPredicted RBP18.14■□□□□ 0.49
USE1-205ENST00000594724 RNF186Q9NXI6 227 aa18.14■□□□□ 0.49
USE1-205ENST00000594724 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
USE1-205ENST00000594724 MECOMQ03112 1051 aa18.13■□□□□ 0.49
USE1-205ENST00000594724 TCP10Q12799 353 aa18.13■□□□□ 0.49
USE1-205ENST00000594724 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
USE1-205ENST00000594724 APBB1O00213 710 aa18.12■□□□□ 0.49
USE1-205ENST00000594724 NFIAQ12857 509 aa18.12■□□□□ 0.49
USE1-205ENST00000594724 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
USE1-205ENST00000594724 ZNF384Q8TF68 577 aa18.12■□□□□ 0.49
USE1-205ENST00000594724 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
USE1-205ENST00000594724 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 SLF2Q8IX21 1173 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
USE1-205ENST00000594724 ANKRD13AQ8IZ07 590 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 FAM151AQ8WW52 585 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 FAM163AQ96GL9 167 aaPredicted RBP18.11■□□□□ 0.49
USE1-205ENST00000594724 IL1RAPL2Q9NP60 686 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 RAI14Q9P0K7 980 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 FAM198AQ9UFP1 575 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 GAKO14976 1311 aa18.11■□□□□ 0.49
USE1-205ENST00000594724 HMMRO75330 724 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 TM4SF4P48230 202 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 HSP90AB4PQ58FF6 505 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.1■□□□□ 0.49
USE1-205ENST00000594724 MIGA2Q7L4E1 593 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 AACSQ86V21 672 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 ZFPM1Q8IX07 1006 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 RHPN1Q8TCX5 695 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 NSUN4Q96CB9 384 aaKnown RBP18.1■□□□□ 0.49
USE1-205ENST00000594724 WNK4Q96J92 1243 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
USE1-205ENST00000594724 MROH7-TTC4A0A0A0MT08 1334 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 UNCXA6NJT0 531 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
USE1-205ENST00000594724 GJA5P36382 358 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 BTDP43251 543 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 ZAP70P43403 619 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.09■□□□□ 0.49
USE1-205ENST00000594724 SAGE1Q9NXZ1 904 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 MYH2Q9UKX2 1941 aa18.09■□□□□ 0.49
USE1-205ENST00000594724 RGS3P49796 1198 aa18.08■□□□□ 0.48
USE1-205ENST00000594724 ZNF512BQ96KM6 892 aaPredicted RBP18.08■□□□□ 0.48
USE1-205ENST00000594724 GPR75-ASB3A0A0A6YYF3 556 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 LDHCP07864 332 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 GSTO1P78417 241 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 VGLL4Q14135 290 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 IDI2Q9BXS1 227 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 NDUFB9Q9Y6M9 179 aa18.07■□□□□ 0.48
USE1-205ENST00000594724 RPAP1Q9BWH6 1393 aaPredicted RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 WDHD1O75717 1129 aaPredicted RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 TBC1D8O95759 1140 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 ZBTB48P10074 688 aaPredicted RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 RHBDL3P58872 404 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 SREBF2Q12772 1141 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 OPTNQ96CV9 577 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 HOOK2Q96ED9 719 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 DDX4Q9NQI0 724 aaKnown RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 PIH1D3Q9NQM4 214 aaKnown RBP18.06■□□□□ 0.48
USE1-205ENST00000594724 CSADQ9Y600 493 aa18.06■□□□□ 0.48
USE1-205ENST00000594724 MANSC4A6NHS7 340 aaPredicted RBP18.05■□□□□ 0.48
USE1-205ENST00000594724 ENTPD3O75355 529 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 CAPN15O75808 1086 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 PICALMQ13492 652 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 DCAF15Q66K64 600 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
USE1-205ENST00000594724 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
USE1-205ENST00000594724 ZNF341Q9BYN7 854 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 AKAP11Q9UKA4 1901 aa18.05■□□□□ 0.48
USE1-205ENST00000594724 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
USE1-205ENST00000594724 INPP5BP32019 993 aa18.04■□□□□ 0.48
USE1-205ENST00000594724 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
USE1-205ENST00000594724 SH3BP5LQ7L8J4 393 aa18.04■□□□□ 0.48
USE1-205ENST00000594724 ZSCAN29Q8IWY8 852 aaPredicted RBP18.04■□□□□ 0.48
USE1-205ENST00000594724 OTOFQ9HC10 1997 aa18.04■□□□□ 0.48
USE1-205ENST00000594724 CASP8AP2Q9UKL3 1982 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 DDTLA6NHG4 134 aaPredicted RBP18.03■□□□□ 0.48
USE1-205ENST00000594724 IFIT2P09913 472 aaKnown RBP18.03■□□□□ 0.48
USE1-205ENST00000594724 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 INHBEP58166 350 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms