RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TCRBV5S4A2TA0A5A2 114 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 NPHP1O15259 732 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 DTNBO60941 627 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 TM4SF1P30408 202 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 CYP2C19P33261 490 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 RPS8P62241 208 aaKnown RBP17.94■□□□□ 0.46
PNKP-204ENST00000594661 UBE3CQ15386 1083 aa17.94■□□□□ 0.46
PNKP-204ENST00000594661 ZNF772Q68DY9 489 aaPredicted RBP17.94■□□□□ 0.46
PNKP-204ENST00000594661 ERICH4A6NGS2 130 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 GYS1P13807 737 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 ZNF397Q8NF99 534 aaPredicted RBP17.93■□□□□ 0.46
PNKP-204ENST00000594661 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 GYG1P46976 350 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
PNKP-204ENST00000594661 ZNF804BA4D1E1 1349 aa17.93■□□□□ 0.46
PNKP-204ENST00000594661 E7EWF7 191 aa17.92■□□□□ 0.46
PNKP-204ENST00000594661 CNBD1Q8NA66 436 aa17.92■□□□□ 0.46
PNKP-204ENST00000594661 FGAP02671 866 aa17.92■□□□□ 0.46
PNKP-204ENST00000594661 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
PNKP-204ENST00000594661 COL1A1P02452 1464 aaPredicted RBP17.91■□□□□ 0.46
PNKP-204ENST00000594661 F13A1P00488 732 aa17.91■□□□□ 0.46
PNKP-204ENST00000594661 PSEN1P49768 467 aa17.91■□□□□ 0.46
PNKP-204ENST00000594661 Q6ZUG5 572 aa17.91■□□□□ 0.46
PNKP-204ENST00000594661 MAGEB6Q8N7X4 407 aa17.91■□□□□ 0.46
PNKP-204ENST00000594661 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
PNKP-204ENST00000594661 KLRK1P26718 216 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 HNRNPH2P55795 449 aaKnown RBP17.9■□□□□ 0.46
PNKP-204ENST00000594661 HAND2P61296 217 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 ATP6V1DQ9Y5K8 247 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 MTMR6Q9Y217 621 aa17.9■□□□□ 0.46
PNKP-204ENST00000594661 GOLGA6L6A8MZA4 724 aa17.89■□□□□ 0.45
PNKP-204ENST00000594661 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 CCDC183Q5T5S1 534 aa17.89■□□□□ 0.45
PNKP-204ENST00000594661 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 FAM84BQ96KN1 310 aaPredicted RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 CNPY2Q9Y2B0 182 aa17.89■□□□□ 0.45
PNKP-204ENST00000594661 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 GADD45BO75293 160 aaPredicted RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 STK3Q13188 491 aa17.89■□□□□ 0.45
PNKP-204ENST00000594661 IMMTQ16891 758 aaKnown RBP17.89■□□□□ 0.45
PNKP-204ENST00000594661 NOP2P46087 812 aaKnown RBP17.88■□□□□ 0.45
PNKP-204ENST00000594661 EXOSC10Q01780 885 aaKnown RBP17.88■□□□□ 0.45
PNKP-204ENST00000594661 KMT5BQ4FZB7 885 aa17.88■□□□□ 0.45
PNKP-204ENST00000594661 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 BRF1Q92994 677 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 AIDAQ96BJ3 306 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 STRBPQ96SI9 672 aaKnown RBP17.87■□□□□ 0.45
PNKP-204ENST00000594661 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
PNKP-204ENST00000594661 SERPINB2P05120 415 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 ZNF827Q17R98 1081 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
PNKP-204ENST00000594661 ANKRD2Q9GZV1 360 aa17.87■□□□□ 0.45
PNKP-204ENST00000594661 MBD4O95243 580 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 DDR1Q08345 913 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 GRAPQ13588 217 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 NAA30Q147X3 362 aaPredicted RBP17.86■□□□□ 0.45
PNKP-204ENST00000594661 CHST3Q7LGC8 479 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 CCDC112Q8NEF3 446 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
PNKP-204ENST00000594661 NBPF3Q9H094 633 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 LRP2BPQ9P2M1 347 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 CTR9Q6PD62 1173 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 FBXO33Q7Z6M2 555 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
PNKP-204ENST00000594661 ZNF213O14771 459 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 CLGNO14967 610 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 AP5Z1O43299 807 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 APBA3O96018 575 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 APPP05067 770 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 PDCP20941 246 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 GTF3C6Q969F1 213 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 AGXT2Q9BYV1 514 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.85■□□□□ 0.45
PNKP-204ENST00000594661 ABCF2Q9UG63 623 aa17.85■□□□□ 0.45
PNKP-204ENST00000594661 PLSCR1O15162 318 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 FIBPO43427 364 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
PNKP-204ENST00000594661 FUCA2Q9BTY2 467 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
PNKP-204ENST00000594661 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
PNKP-204ENST00000594661 RXRBP28702 533 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 ST5P78524 1137 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
PNKP-204ENST00000594661 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 RASSF4Q9H2L5 321 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 RSPH14Q9UHP6 348 aa17.84■□□□□ 0.45
PNKP-204ENST00000594661 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms